Documentation and tutorials on using AWS for biomedical research
☆19Jun 10, 2026Updated 2 weeks ago
Alternatives and similar repositories for NIHCloudLabAWS
Users that are interested in NIHCloudLabAWS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Documentation and tutorials on using GCP for biomedical research☆36Jun 10, 2026Updated 2 weeks ago
- A software toolkit for the interconversion of standard data models for phenotypic data☆16May 29, 2026Updated last month
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆37Jul 10, 2024Updated last year
- deploy a snakemake pipeline directly from version control (under development)☆26Jun 18, 2026Updated last week
- Code for the Recount project☆11Dec 13, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Clinical Whole Genome and Exome Sequencing Pipeline☆31Oct 27, 2025Updated 8 months ago
- ☆13May 27, 2025Updated last year
- This repo contains the knitr code for the paper: Gillespie, C. S., et al, 2010. Analysing yeast time course microarray data using BioCond…☆12Jan 25, 2016Updated 10 years ago
- Introduction to Cloud Computing for Genomics☆21Jun 23, 2026Updated last week
- Sandbox for playing with Neo4J and graph approaches to NLP☆12Jul 12, 2017Updated 8 years ago
- A Jupyter extension for fsspec☆18Aug 27, 2025Updated 10 months ago
- A library for GNU make to schedule rules as jobs with qsub or sbatch☆11Mar 7, 2013Updated 13 years ago
- A preprocessing pipeline for ChIP-seq, including alignment, quality control, and visualization.☆27Apr 24, 2017Updated 9 years ago
- Personal diploid genome creation and coordinate conversion☆31Apr 1, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bootstrap imputation for scRNAseq data☆12Jul 18, 2020Updated 5 years ago
- Example of using JupyterHub with JupyterLab RTC☆11Dec 17, 2021Updated 4 years ago
- Gene expression viewer template☆12Aug 30, 2017Updated 8 years ago
- ☆27May 16, 2025Updated last year
- Python text classification package with a focus on medical text.☆17Jun 28, 2021Updated 5 years ago
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆11Dec 7, 2022Updated 3 years ago
- Code for Dligach and Miller 2018 paper Learning Patient Representations from Text☆10Apr 2, 2023Updated 3 years ago
- A python toolkit for building and querying multi-string BWTs☆27Mar 2, 2017Updated 9 years ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Standalone shiny server container for viewing CellChat object☆14Feb 18, 2021Updated 5 years ago
- Impute to 1000 genomes efficiently by distributing to SGE, including alignment of target to reference, haplotyping, imputing, converting …☆14May 28, 2014Updated 12 years ago
- An Interactive Tool for Natural Language Processing on Clinical Text☆15Aug 20, 2021Updated 4 years ago
- ImgLib2 integration for ClearVolume☆12Jun 11, 2026Updated 2 weeks ago
- ☆11Mar 4, 2025Updated last year
- Template for creating a new python repository☆13Sep 28, 2025Updated 9 months ago
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 4 months ago
- Lecture notes/book in progress on computing for conservation genomics☆39Jan 29, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- IMOD model files as pandas dataframes in Python☆13Jun 26, 2025Updated last year
- Two-Dimensional Template Matching implemented in Python☆16Jun 22, 2026Updated last week
- Fast, Accurate, and Complete SSR Detection in Genomic Sequences☆11Jun 29, 2020Updated 6 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- R Package for phasing of single cell Strand-seq data☆11Jan 14, 2025Updated last year
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated 11 months ago
- IsoNet at higher resolution☆37Updated this week