meyresearch / DL_protein_ligand_affinityLinks
From Proteins to Ligands: Decoding Deep Learning Methods for Binding Affinity Prediction
☆18Updated last year
Alternatives and similar repositories for DL_protein_ligand_affinity
Users that are interested in DL_protein_ligand_affinity are comparing it to the libraries listed below
Sorting:
- dMaSIF implementation for google colab☆36Updated 2 years ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆35Updated last year
- Code for designing biased protein states☆16Updated last month
- Rank binders by structure modeling☆16Updated 9 months ago
- protein structure generation with sparse all-atom denoising models☆53Updated 3 weeks ago
- ☆21Updated last year
- Some scripts that I keep using over and over.☆21Updated 6 months ago
- An antibody-specific language model focusing on NGL prediction☆33Updated last year
- ☆27Updated 4 months ago
- Consolidated repository to perform RLXF☆36Updated 2 months ago
- Docking Tool Benchmarking Workflow☆24Updated last year
- ☆72Updated 9 months ago
- ☆21Updated last year
- ☆21Updated 2 years ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆41Updated 9 months ago
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆27Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆35Updated 2 years ago
- ☆39Updated last year
- Code for the paper "Learning to engineer protein flexibility".☆22Updated last month
- Fast and accurate molecular docking with an AI pose scoring function☆42Updated last year
- Physical energy function for protein sequence design☆34Updated 2 years ago
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆18Updated 5 months ago
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆30Updated 3 months ago
- Generative diverse protein backbones by protein language model☆34Updated 2 months ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 7 months ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆21Updated last year
- One protein is all you need☆61Updated 3 weeks ago
- Public version for Distance-AF☆30Updated 4 months ago
- Code for peptide ligand design with machine learning models.☆28Updated last year
- ☆27Updated last year