Neural networks to model BCR affinity maturation
☆20May 11, 2026Updated 4 months ago
Alternatives and similar repositories for netam
Users that are interested in netam are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Agents for Claude Code☆23May 6, 2026Updated 5 months ago
- Tools for annotation, processing and ML for antibody sequences☆45Sep 23, 2026Updated 2 weeks ago
- Repository for code and models for the paper "Extrapolative Controlled Sequence Generation via Iterative Refinement"☆16Mar 5, 2024Updated 2 years ago
- Phylogenetic Likelihood Library 2 - experimental☆12May 12, 2025Updated last year
- Explore and analyze biological sequence data☆19Aug 1, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆18Sep 10, 2024Updated 2 years ago
- Simple Manipulation Of Trees☆13Aug 16, 2025Updated last year
- Official repository for discrete Walk-Jump Sampling (dWJS)☆59Dec 17, 2023Updated 2 years ago
- Script that labels phylogenetic clades based on the clade of the nearest neighbor using patristic distances determined from the tree.☆15Dec 11, 2024Updated last year
- a pytorch version for GREMLIN, used to predict the protein contacts by coevolution method.☆17May 30, 2021Updated 5 years ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆87Oct 2, 2026Updated last week
- An antibody-specific language model focusing on NGL prediction☆45Aug 22, 2024Updated 2 years ago
- ☆34Dec 6, 2025Updated 10 months ago
- Repository containing a method for automatically identifying pathogen lineages from a phylogeny.☆17May 19, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Embeddings to Network Alignment - align biological networks between two species☆10Sep 8, 2023Updated 3 years ago
- ☆10Mar 10, 2023Updated 3 years ago
- FluMut is a command-line tool to find markers of interest in H5N1 avian influenza viruses.☆15Sep 10, 2026Updated last month
- Python code to run Supervised Molecular Dynamics (SuMD) simulations☆16Apr 24, 2024Updated 2 years ago
- JAX translation of boltz☆32Aug 11, 2026Updated last month
- Contrastive learning of protein representations with graph neural networks for structural and functional annotations☆11Apr 23, 2023Updated 3 years ago
- Propose CDR single-point mutations that rescue antibody expression without disrupting antigen binding, using bound vs. unbound ProteinMPN…☆15May 26, 2026Updated 4 months ago
- ☆58May 26, 2026Updated 4 months ago
- AbLang: A language model for antibodies☆172Sep 22, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Canonical normalizing flows☆10Apr 30, 2019Updated 7 years ago
- A protein language model for learning the SARS-CoV-2 fitness landscape☆16Apr 22, 2025Updated last year
- Pretrained METL models with minimal dependencies☆16Sep 16, 2026Updated 3 weeks ago
- GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the fam…☆26Jul 3, 2016Updated 10 years ago
- KDS software for Kinase Drug Selectivity☆10Jun 22, 2026Updated 3 months ago
- ☆14Aug 5, 2015Updated 11 years ago
- ☆16May 19, 2024Updated 2 years ago
- The Expanded Package for IET Solvation☆14Feb 6, 2025Updated last year
- ☆77Jun 16, 2026Updated 3 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆121Dec 7, 2022Updated 3 years ago
- ☆34Jun 9, 2026Updated 4 months ago
- Official repo of "Towards Interpretable Protein Structure Prediction with Sparse Autoencoders" published at ICLR 2025 GEM workshop.☆17Mar 13, 2025Updated last year
- Decoding the functional networks of non-model organisms☆13Aug 12, 2026Updated last month
- ☆11Oct 28, 2022Updated 3 years ago
- ☆11Sep 2, 2024Updated 2 years ago
- GitHub repository for "Leveraging Implicit Knowledge in Neural Networks for Functional Dissection and Engineering of Proteins"☆18Mar 31, 2019Updated 7 years ago