Alternatives and similar repositories for DrugOrchestra

Users that are interested in DrugOrchestra are comparing it to the libraries listed below

• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆71Updated last year
• kiharalab / GNN_DOVE
  Code for "Protein Docking Model Evaluation by Graph Neural Networks"
  ☆59Updated 2 years ago
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆48Updated 3 years ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆45Updated 3 years ago
• sarisabban / RamaNet
  Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
  ☆52Updated 11 months ago
• amyxlu / CPCProt
  Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.
  ☆30Updated 6 months ago
• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆54Updated 3 years ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆34Updated last year
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆61Updated 2 years ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆60Updated last week
• Graylab / deepH3-distances-orientations
  ☆35Updated 4 years ago
• DarkMatterAI / mrl
  Molecular Reinforcement Learning
  ☆14Updated 2 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆44Updated 2 years ago
• BioinfoMachineLearning / EnQA
  A 3D-equivariant neural network for protein structure accuracy estimation
  ☆20Updated 2 years ago
• LPDI-EPFL / Bottom-up-de-novo-design
  ☆15Updated 5 years ago
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆36Updated 4 years ago
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆36Updated 2 years ago
• ostrokach / proteinsolver
  Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
  ☆60Updated 4 years ago
• jertubiana / ProteinMotifRBM
  Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox
  ☆20Updated 7 years ago
• cansyl / MDeePred
  Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery
  ☆28Updated 4 years ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆38Updated 3 years ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆41Updated 2 years ago
• jscant / PointVS
  SE(3)-equivariant point cloud networks for virtual screening
  ☆24Updated 2 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆26Updated last year
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆54Updated 4 years ago
• biofold / ddgun
  predict stability change upon mutation
  ☆30Updated last year
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆42Updated last year
• cmbi / dssp
  The DSSP building software
  ☆50Updated 2 years ago
• bouralab / Prop3D
  A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…
  ☆38Updated last year