Random collection of bioinformatics thingies
☆19Mar 13, 2016Updated 10 years ago
Alternatives and similar repositories for bio-playground
Users that are interested in bio-playground are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- variant discovery and annotation using GATK and Ensembl☆17Jun 27, 2013Updated 13 years ago
- Useful FILe and stream Operations☆45Dec 21, 2015Updated 10 years ago
- ☆18Mar 5, 2017Updated 9 years ago
- R package with Shiny application for DGE analysis☆12Jan 8, 2024Updated 2 years ago
- all-paths graph kernel for protein-protein interaction extraction☆12Apr 22, 2014Updated 12 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- PCA in rust☆16Jul 30, 2023Updated 2 years ago
- A collection of CSV/TSV Utilities☆13Jun 2, 2020Updated 6 years ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆87Dec 11, 2017Updated 8 years ago
- A pipeline to assess the quantification of transcripts.☆19Jun 6, 2022Updated 4 years ago
- The wiki repo, with pull request enabled, for the rnaseq_tutorial☆26May 7, 2020Updated 6 years ago
- Autonomous and accurate clustering of co-localized ion images in a self-supervised manner.☆12Dec 22, 2021Updated 4 years ago
- Targeted Amplicon Bisulfite Sequencing Analysis Tool☆11May 8, 2019Updated 7 years ago
- Polygenic score calculation from VCF in Nim.☆15Nov 22, 2020Updated 5 years ago
- A TensorFlow implementation on Deep Clustering Network(DCN), ICML 2017☆13Oct 21, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- UNCURL is a tool for single cell RNA-seq data analysis.☆15Jun 27, 2022Updated 4 years ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆16May 4, 2021Updated 5 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 3 years ago
- ☆21Dec 26, 2025Updated 6 months ago
- ☆16Dec 11, 2018Updated 7 years ago
- PySeqArray: data manipulation of whole-genome sequencing variants with SeqArray files in Python (pre-release version)☆14Aug 25, 2017Updated 8 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Mar 17, 2016Updated 10 years ago
- Human embryonic cell altas☆13Dec 31, 2019Updated 6 years ago
- Miniature LIMS and workflow manager for bioinformatics☆41Aug 17, 2011Updated 14 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Dockerfile for Nim lang☆20Jan 23, 2021Updated 5 years ago
- elPrep reimplementations in C++ and Java, only for benchmark comparisons☆10Feb 13, 2023Updated 3 years ago
- Scripts for data and figure generation in SAVER paper☆18Jan 5, 2021Updated 5 years ago
- Variant call adjudication☆17Jun 13, 2024Updated 2 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆13Dec 15, 2021Updated 4 years ago
- ☆16May 25, 2021Updated 5 years ago
- 爱玖剑灵助手-xml.dat修改工具☆10Mar 26, 2020Updated 6 years ago
- Recipes for bioinformatics analyses with scikit-bio☆47Sep 8, 2025Updated 10 months ago
- ☆21Aug 30, 2018Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Real time data analysis tools for the minION sequencing platform.☆30Apr 12, 2022Updated 4 years ago
- Biopet docs☆17Aug 2, 2018Updated 7 years ago
- NGSTools☆16Mar 3, 2017Updated 9 years ago
- A Shotgun Metagenome Annotation Pipeline☆24Mar 24, 2017Updated 9 years ago
- ☆15Feb 13, 2023Updated 3 years ago
- Target / Integrative Genetic Element Retriever: precisely maps IGEs (a defined type of genomic island) in bacterial and archaeal genomes;…☆21Sep 2, 2025Updated 10 months ago
- A tool that lets you quickly flip through images in a local directory and record notes or answer questions about each one.☆21Jan 4, 2026Updated 6 months ago