Alternatives and similar repositories for romim

Users that are interested in romim are comparing it to the libraries listed below

• ramiromagno / gwasrapidd
  gwasrapidd: an R package to query, download and wrangle GWAS Catalog data
  ☆99Updated 6 months ago
• Bioconductor / CSAMA
  Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
  ☆94Updated last year
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆74Updated 3 weeks ago
• jokergoo / InteractiveComplexHeatmap
  Make Interactive Complex Heatmaps
  ☆138Updated last year
• alanocallaghan / scater
  Clone of the Bioconductor repository for the scater package.
  ☆96Updated 9 months ago
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆84Updated 4 months ago
• stemangiola / tidyseurat
  Seurat meets tidyverse. The best of both worlds.
  ☆160Updated last month
• Bioconductor / Contributions
  Contribute Packages to Bioconductor
  ☆144Updated 8 months ago
• CBIIT / LDlinkR
  LDlinkR
  ☆62Updated last year
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆69Updated 2 weeks ago
• tidyomics / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆174Updated last month
• MRCIEU / metaboprep
  a pipeline of metabolomics data processing and quality control
  ☆27Updated last week
• bvieth / powsimR
  Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…
  ☆107Updated 2 years ago
• stephaniehicks / bioconductorNotes
  My notes/usage examples for various Bioconductor packages
  ☆15Updated 8 years ago
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆199Updated last year
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆166Updated 5 months ago
• cran / WGCNA
   This is a read-only mirror of the CRAN R package repository. WGCNA — Weighted Correlation Network Analysis
  ☆54Updated last year
• Bioconductor / bioconductor_docker
  Docker Containers for Bioconductor
  ☆88Updated last week
• seandavi / GEOquery
  The bridge between the NCBI Gene Expression Omnibus and Bioconductor
  ☆101Updated 2 weeks ago
• DillonHammill / CytoExploreR
  Interactive Cytometry Data Analysis
  ☆67Updated 3 weeks ago
• YuLab-SMU / ReactomePA
  Reactome Pathway Analysis
  ☆43Updated last week
• egeulgen / pathfindR
  pathfindR: Enrichment Analysis Utilizing Active Subnetworks
  ☆195Updated 2 months ago
• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆76Updated 6 years ago
• Bioconductor / OrchestratingSingleCellAnalysis-release
  An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
  ☆37Updated 2 years ago
• ShixiangWang / sigminer
  🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…
  ☆157Updated 2 weeks ago
• drisso / SingleCellExperiment
  Clone of the Bioconductor repository for the SingleCellExperiment package, see https://bioconductor.org/packages/devel/bioc/html/SingleCe…
  ☆75Updated 5 months ago
• jminnier / STARTapp
  The START App: R Shiny Transcriptome Analysis Resource Tool
  ☆88Updated 5 years ago
• waldronlab / enrichOmics
  Functional enrichment analysis of high-throughput omics data
  ☆20Updated 11 months ago
• hansenlab / minfi
  Devel repository for minfi
  ☆64Updated last year
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆225Updated last year