domdfcoding / pynist
PyMassSpec extension for searching mass spectra using NIST's Mass Spectrum Search Engine.
☆19Updated 3 weeks ago
Alternatives and similar repositories for pynist:
Users that are interested in pynist are comparing it to the libraries listed below
- ☆23Updated 11 months ago
- ☆33Updated last month
- A small library to provide peak picking for software processing mass spectrometry data☆20Updated last month
- Streamlining Mass Spectrometry Data Visualization with Pandas☆11Updated 3 weeks ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated 2 months ago
- Fiora is an in silico fragmentation algorithm for small compounds that produces simulated tandem mass spectra (MS/MS). The framework empl…☆26Updated 2 weeks ago
- ☆22Updated last year
- Flash entropy search☆14Updated last year
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆57Updated this week
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆19Updated 2 weeks ago
- ☆31Updated last month
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆13Updated last year
- TidyMS: Tools for working with MS data in untargeted metabolomics☆55Updated 6 months ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆27Updated this week
- ☆17Updated 8 months ago
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆10Updated 3 years ago
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 8 months ago
- Relaunch of the initial MetFrag project.☆17Updated this week
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- ☆16Updated 2 years ago
- A python client for the ClassyFire API☆16Updated 4 years ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆28Updated last month
- ☆20Updated last year
- a python package for molecular formula analysis in MS-based small molecule studies☆23Updated 3 weeks ago
- ☆15Updated 3 years ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆41Updated last month
- ☆8Updated 4 months ago
- Predicting molecular fingerprint from electron−ionization mass spectrum with deep neural networks☆35Updated 10 months ago
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆20Updated last week
- An open-source Python package to unify raw MS data accession and storage.☆18Updated last week