iit-Demokritos / drug_id_mapping
Cross matching drugs from different databases ( Drugbank, STITCH, ChEMBL PubChem, UMLS, TTD, KEGG, ZINC ) and saving in a structured TSV file.
☆21Updated last year
Alternatives and similar repositories for drug_id_mapping:
Users that are interested in drug_id_mapping are comparing it to the libraries listed below
- Network-based project to explore gene connectivity through biological scales☆23Updated 5 months ago
- Library of Integrated Cellular Signatures L1000☆31Updated 2 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆20Updated 6 years ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆60Updated last month
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆110Updated 3 years ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆22Updated 2 months ago
- Biological Network Integration using Convolutions☆62Updated last year
- ☆10Updated last year
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆50Updated 10 months ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆41Updated 5 months ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated last year
- ☆14Updated 2 years ago
- ☆17Updated 6 months ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆54Updated 4 years ago
- Build PharMeBINet from different sources.☆16Updated 2 weeks ago
- ☆66Updated last year
- Interpretable identification of cancer genes across biological networks via transformer-powered graph representation learning☆16Updated 3 weeks ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆49Updated 3 years ago
- Multi-omics integration method using AE and GCN☆34Updated last year
- Harmonizing pathway databases using Biological Expression Language (BEL)☆19Updated 9 months ago
- A Python package for drug discovery by analyzing causal paths on multiscale networks☆26Updated 9 months ago
- A deep-learning framework for multi-omics integration☆25Updated last year
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆23Updated 3 weeks ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆32Updated last year
- code for Gogleva et al manuscript☆45Updated 2 years ago
- Code for the analyses in the human reference interactome paper.☆27Updated 2 years ago
- Target prioritization using network representation learning☆11Updated 3 years ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- Random Walk with Restart on Multiplex and Heterogeneous Biological Networks☆36Updated 5 years ago