iit-Demokritos / drug_id_mappingLinks
Cross matching drugs from different databases ( Drugbank, STITCH, ChEMBL PubChem, UMLS, TTD, KEGG, ZINC ) and saving in a structured TSV file.
☆29Updated last year
Alternatives and similar repositories for drug_id_mapping
Users that are interested in drug_id_mapping are comparing it to the libraries listed below
Sorting:
- Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)☆111Updated 3 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆55Updated 4 years ago
- Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19☆27Updated 4 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 8 months ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆34Updated last year
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆72Updated 4 months ago
- ☆67Updated 2 years ago
- ☆17Updated 2 years ago
- Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…☆145Updated last week
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆51Updated last year
- Biological Network Integration using Convolutions☆62Updated last year
- A Deep Learning based Efficacy Prediction System for drug discovery☆66Updated 2 years ago
- Random Walk with Restart on Multiplex and Heterogeneous Biological Networks☆36Updated 5 years ago
- A deep generative neural network based approach to impute drug response☆21Updated 4 years ago
- drugbank相关数据的处理，包括获取药物sdf结构文件，drug相关信息，drug作用相关蛋白信息，drugbank中drug id与其他数据库的映射，protein蛋白相关信息到其他数据库的映射☆22Updated 4 years ago
- ☆57Updated 5 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆50Updated 4 years ago
- CMap Notebooks for LINCS 2020 Workshop☆46Updated 3 years ago
- Multi-omics integration method using AE and GCN☆36Updated 2 years ago
- Multi-omics biomarker discovery tool exploiting a gene-gene interaction network☆16Updated last year
- code for Gogleva et al manuscript☆45Updated 2 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- Code for the analyses in the human reference interactome paper.☆27Updated 2 years ago
- Library of Integrated Cellular Signatures L1000☆31Updated 3 years ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Updated 4 years ago
- An explainable multi-omics graph integration method based on graph convolutional networks to predict cancer genes.☆152Updated 3 years ago
- A visible neural network model for drug response prediction☆144Updated last year
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆24Updated 5 months ago
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆65Updated 2 months ago
- This repository contains the tensorflow implementation of "GNE: A deep learning framework for gene network inference by aggregating biolo…☆31Updated 4 years ago