neuroinformatics-unit / datashuttleLinks
Tool for the creation, validation and transfer of neuroscience project folders.
☆25Updated this week
Alternatives and similar repositories for datashuttle
Users that are interested in datashuttle are comparing it to the libraries listed below
Sorting:
- A package to manage electrophysiology analysis.☆23Updated this week
- NIU website on common software problems and their troubleshooting☆10Updated 2 weeks ago
- ☆10Updated 2 years ago
- Build unbiased anatomical templates from individual images☆11Updated 2 weeks ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated this week
- Re-usable GitHub Action scripts☆10Updated this week
- Mix-and-match computer vision tools for your animal behaviour analysis☆18Updated last week
- A repository for our participation in Google Summer of Code☆12Updated 3 months ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated this week
- Anatomical space conventions made easy.☆10Updated this week
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 5 months ago
- Fancier logging with python.☆12Updated last month
- Read and write files from the BrainGlobe neuroanatomy suite☆14Updated this week
- ☆10Updated last year
- Utility to create a basic Python project structure with tests, CI etc.☆32Updated this week
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated last year
- Visualisation and exploration of brain atlases☆9Updated 4 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated this week
- Brainways☆19Updated 2 months ago
- Visualise brainreg registration output☆10Updated 3 years ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- DREEM Relates Every Entities' Motion (DREEM). Global Tracking Transformers for biological multi-object tracking.☆10Updated 2 weeks ago
- Loading and saving of image data.☆10Updated last year
- Segmentation of anatomical structures in a common coordinate space☆33Updated this week
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆22Updated 2 years ago
- Fast, volumetric cell detection. In development.☆18Updated 2 months ago
- LISBET Is a Social BEhavior Transformer (LISBET)☆12Updated this week
- Registration to BrainGlobe atlases in napari using Elastix☆22Updated this week
- Collection of probe description for probeinterface☆16Updated 3 weeks ago