neuroinformatics-unit / datashuttleLinks
Tool for the creation, validation and transfer of neuroscience project folders.
☆28Updated this week
Alternatives and similar repositories for datashuttle
Users that are interested in datashuttle are comparing it to the libraries listed below
Sorting:
- A repository for our participation in Google Summer of Code☆13Updated 7 months ago
- A package to manage electrophysiology analysis.☆22Updated last week
- NIU website on common software problems and their troubleshooting☆10Updated 2 weeks ago
- ☆10Updated 2 years ago
- Re-usable GitHub Action scripts☆13Updated this week
- Mix-and-match computer vision tools for your animal behaviour analysis☆21Updated this week
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated last week
- Anatomical space conventions made easy.☆12Updated last week
- Build unbiased anatomical templates from individual images☆12Updated this week
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated this week
- Fancier logging with python.☆14Updated last week
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 9 months ago
- brainglobe.info website☆11Updated last week
- Utility to create a basic Python project structure with tests, CI etc.☆34Updated last week
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated 2 years ago
- Loading and saving of image data.☆10Updated last year
- Read and write files from the BrainGlobe neuroanatomy suite☆15Updated last week
- ☆11Updated last month
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 5 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated last week
- Segmentation of anatomical structures in a common coordinate space☆34Updated last week
- Visualise brainreg registration output☆10Updated 4 years ago
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆23Updated 2 years ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Brainways☆22Updated 3 months ago
- LISBET Is a Social BEhavior Transformer (LISBET)☆11Updated 2 weeks ago
- Registration to BrainGlobe atlases in napari using Elastix☆24Updated this week
- DREEM Relates Every Entities' Motion (DREEM). Global Tracking Transformers for biological multi-object tracking.☆13Updated last week
- Fast, volumetric cell detection. In development.☆20Updated last month
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year