Alternatives and similar repositories for primer

Users that are interested in primer are comparing it to the libraries listed below

• pillowlab / GLMspiketraintutorial
  Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data
  ☆97Updated 3 years ago
• pillowlab / neuroGLM
  Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
  ☆71Updated 5 years ago
• nsteinme / steinmetz-et-al-2019
  Code accompanying Steinmetz et al., 2019
  ☆60Updated 4 years ago
• FeeLab / seqNMF
  An algorithm for unsupervised discovery of sequential structure
  ☆169Updated last year
• pillowlab / GLMspiketools
  Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).
  ☆43Updated 6 years ago
• NeurodataWithoutBorders / matnwb
  A Matlab interface for reading and writing NWB files
  ☆57Updated this week
• pillowlab / GLMspiketraintutorial_python
  ☆60Updated 3 years ago
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆50Updated 4 months ago
• flatironinstitute / mountainlab-js
  MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…
  ☆46Updated 6 years ago
• iahncajigas / nSTAT
  Neural Spike Train Analysis Toolbox for Matlab
  ☆34Updated 8 years ago
• spyking-circus / spyking-circus
  Fast and scalable spike sorting in python
  ☆95Updated 4 months ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆46Updated 6 years ago
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆70Updated 3 years ago
• PeyracheLab / Tutorial_HDPlaceCells_Analysis
  A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.
  ☆15Updated 7 years ago
• cortex-lab / KiloSort
  GPU code for spike sorting
  ☆189Updated last year
• cortex-lab / neuropixels
  Information about Neuropixels electrode arrays
  ☆96Updated last year
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆68Updated 2 years ago
• PeyracheLab / StarterPack
  Tutorial
  ☆11Updated 4 years ago
• kampff-lab / sc.io
  Scientific Input-Output; Science-Open
  ☆20Updated 5 years ago
• schultzlab / Neural_Manifolds
  A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…
  ☆30Updated 2 years ago
• mariomulansky / PySpike
  Python implementation of spike distance metrics
  ☆75Updated last year
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆34Updated 2 years ago
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆122Updated last year
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆52Updated 2 months ago
• KordingLab / spykes
  Tools for spike data analysis and visualization
  ☆110Updated 2 years ago
• buzsakilab / 3d_print_designs
  ☆18Updated last year
• rajanlab / CURBD
  Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)
  ☆55Updated 4 years ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated 2 years ago
• cortex-lab / alyx
  Database for experimental neuroscience laboratories
  ☆50Updated last week
• scratcharchive / mountainsort_examples
  Examples of using MountainSort spike sorting software.
  ☆28Updated 6 years ago