Lightweight data specification for systems neuroscience, inspired by BIDS.
☆21Dec 16, 2025Updated 5 months ago
Alternatives and similar repositories for NeuroBlueprint
Users that are interested in NeuroBlueprint are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Oct 21, 2025Updated 7 months ago
- Re-usable GitHub Action scripts☆14May 5, 2026Updated 3 weeks ago
- NIU website on common software problems and their troubleshooting☆10May 15, 2026Updated last week
- Build unbiased anatomical templates from individual images☆12May 5, 2026Updated 3 weeks ago
- brainglobe.info website☆14Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Visualise brainreg registration output☆10Nov 20, 2021Updated 4 years ago
- Fancier logging with python.☆16May 8, 2026Updated 2 weeks ago
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- Loading and saving of image data.☆10Feb 9, 2024Updated 2 years ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- Pose estimation scripts to be run on the SWC HPC cluster☆12Dec 5, 2023Updated 2 years ago
- Anatomical space conventions made easy.☆12May 5, 2026Updated 3 weeks ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆24May 14, 2026Updated last week
- A package to manage electrophysiology analysis.☆23May 18, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆10Mar 15, 2023Updated 3 years ago
- Tool for the creation, validation and transfer of neuroscience project folders.☆34May 5, 2026Updated 3 weeks ago
- A Python package to download neuronal morphologies☆17May 5, 2026Updated 3 weeks ago
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Jan 5, 2024Updated 2 years ago
- Read and write files from the BrainGlobe neuroanatomy suite☆15May 5, 2026Updated 3 weeks ago
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Dec 11, 2020Updated 5 years ago
- Utility to create a basic Python project structure with tests, CI etc.☆38May 5, 2026Updated 3 weeks ago
- Standalone cellfinder cell detection algorithm☆20Jan 3, 2024Updated 2 years ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆27May 4, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Registration to BrainGlobe atlases in napari using Elastix☆29May 5, 2026Updated 3 weeks ago
- A repository for our participation in Google Summer of Code☆13Apr 15, 2025Updated last year
- Segmentation of anatomical structures in a common coordinate space☆36May 5, 2026Updated 3 weeks ago
- An R toolbox for analysing movement across space and time☆11Jan 16, 2026Updated 4 months ago
- Efficient cell detection in large images using cellfinder in napari☆22Jan 5, 2024Updated 2 years ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆39Nov 24, 2023Updated 2 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆51May 5, 2026Updated 3 weeks ago
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆23Apr 24, 2023Updated 3 years ago
- DREEM Relates Every Entities' Motion (DREEM). Global Tracking Transformers for biological multi-object tracking.☆17Mar 23, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Python toolbox for analysing animal body movements across space and time☆277Updated this week
- Behavior Classifier Component from the Jax Animal Behavior System☆25May 15, 2026Updated last week
- GPU-based 3D non-rigid volumetric registration☆49Aug 26, 2025Updated 9 months ago
- A Python interface to access neuroanatomical atlases☆179Updated this week
- Store for video frames and metadata. Seekable & scaleable☆11Feb 20, 2026Updated 3 months ago
- Automated 3D brain registration with support for multiple species and atlases.☆148May 5, 2026Updated 3 weeks ago
- NWB extension to store pose estimation data☆17Feb 27, 2026Updated 2 months ago