neuroinformatics-unit / NeuroBlueprintLinks
Lightweight data specification for systems neuroscience, inspired by BIDS.
☆19Updated last week
Alternatives and similar repositories for NeuroBlueprint
Users that are interested in NeuroBlueprint are comparing it to the libraries listed below
Sorting:
- Fancier logging with python.☆14Updated last week
- ☆10Updated 2 years ago
- A package to manage electrophysiology analysis.☆22Updated last week
- Re-usable GitHub Action scripts☆13Updated this week
- Pose estimation scripts to be run on the SWC HPC cluster☆12Updated 2 years ago
- Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to …☆23Updated 2 years ago
- NIU website on common software problems and their troubleshooting☆10Updated 2 weeks ago
- ☆11Updated last month
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 5 years ago
- A repository for our participation in Google Summer of Code☆13Updated 7 months ago
- Anatomical space conventions made easy.☆12Updated last week
- General information, resources and dicussions for the BrainGlobe project.☆11Updated 9 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆46Updated last week
- brainglobe.info website☆11Updated last week
- Browser-based NWB visualization and DANDI exploration☆62Updated 2 weeks ago
- analysis tools for large-scale neural recordings☆16Updated 8 months ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆21Updated this week
- Utility to create a basic Python project structure with tests, CI etc.☆34Updated last week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆16Updated last year
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆71Updated this week
- Build unbiased anatomical templates from individual images☆12Updated this week
- Collection of probe description for probeinterface☆17Updated 3 weeks ago
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Updated 4 years ago
- Fast, volumetric cell detection. In development.☆20Updated last month
- LISBET Is a Social BEhavior Transformer (LISBET)☆11Updated 2 weeks ago
- Analyze neuroscience data in the cloud☆19Updated last year
- Segmentation of anatomical structures in a common coordinate space☆34Updated last week
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆22Updated this week
- Interactive Python course for using the Neurodata Without Borders format☆15Updated 6 years ago
- Collection of tools to handle Neuropixel 1.0 and 2.0 data☆17Updated this week