neurojak / pySpinCapture
a python wrapper to the FLIR PySpin API to capture synchronized video
☆22Updated last year
Related projects ⓘ
Alternatives and complementary repositories for pySpinCapture
- Match suite2p ROIs between imaging sessions☆23Updated 5 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆64Updated last week
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆24Updated 10 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆29Updated last month
- Fiber photometry analysis☆19Updated 2 weeks ago
- miniscope analysis pipeline with interactive visualizations☆91Updated 3 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated 11 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆45Updated last year
- A gui for browsing joint calcium imaging + behavioral data.☆50Updated 3 months ago
- ☆51Updated 2 months ago
- pipeline for volumetric cell segmentation☆11Updated last week
- pyqt5 dependent applications for IBL sessions☆25Updated this week
- Region Of Interest Classification and Tracking☆14Updated this week
- Fiber Photometry Modular Analysis Tool Suite☆34Updated 3 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆27Updated 4 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆35Updated last month
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆47Updated 2 years ago
- Histology processing☆64Updated 7 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆67Updated last month
- ☆14Updated 2 years ago
- Multi-probe trajectory planning in an intuitive 3D environment☆46Updated 3 weeks ago
- QDSpy - a Python software for scripting and presenting stimuli for visual neuroscience.☆9Updated 3 weeks ago
- Single photon tools for Neuroscience☆35Updated 10 months ago
- Serial-section automated anatomy extension for ScanImage☆12Updated last month
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆82Updated 3 months ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆61Updated 2 weeks ago
- A tool to streamline extracellular electrophysiology analysis using SpikeInterface☆13Updated this week
- Rendering anatomical heatmaps with brainrender and matplotlib☆34Updated this week
- a napari plugin for labeling and refining keypoint data within DeepLabCut projects☆52Updated 2 weeks ago