bermanlabemory / motionmapperpyLinks
Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
☆33Updated 6 months ago
Alternatives and similar repositories for motionmapperpy
Users that are interested in motionmapperpy are comparing it to the libraries listed below
Sorting:
- ☆101Updated 2 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 11 months ago
- DeepGraphPose☆32Updated 3 years ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆198Updated last year
- Revealing neural correlates of behavior without behavioral measurements☆15Updated 6 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 5 months ago
- ☆115Updated 4 months ago
- Toolbox for analyzing behavioral videos and neural activity☆59Updated 2 years ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆61Updated 2 years ago
- ☆24Updated 5 years ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆203Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- ☆52Updated last year
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 9 months ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆115Updated this week
- a module for kinematic analysis of deeplabcut outputs☆148Updated 2 years ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆65Updated 6 months ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆53Updated 6 months ago
- Code package that allows meta analyses of unsupervised behavior results☆19Updated 6 months ago
- Ensembling and kalman smoothing for pose estimation☆30Updated 2 weeks ago
- Registration of cells across sessions.☆75Updated last year
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.☆47Updated last month
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- Histology processing☆71Updated last week
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆39Updated 3 months ago
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆73Updated 5 months ago
- Sample implementation of the MotionMapper behavioral analysis algorithms☆81Updated 5 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated 2 years ago