vanTeeffelenLab / ExTrack

Related projects: ⓘ

• sylvainprigent / stracking
  python library for particles tracking in 2D+t and 3D+t scientific images
  ☆13Updated 3 months ago
• haesleinhuepf / devbio-napari
  ☆42Updated 3 weeks ago
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated 2 weeks ago
• HenriquesLab / NanoPyx
  Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging
  ☆63Updated 2 weeks ago
• CamachoDejay / teaching-bioimage-analysis-python
  A place to collect information used in lectures, demos, workshops, etc.
  ☆16Updated last week
• UU-cellbiology / DoM_Utrecht
  Detection of Molecules plugin for ImageJ, Utrecht University
  ☆14Updated last year
• guiwitz / napari-serialcellpose
  ☆15Updated 2 years ago
• oanegros / Blender_for_Biologists_2023
  ☆35Updated last month
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆77Updated this week
• sofroniewn / napari-training-course
  Lectures for a napari training course
  ☆50Updated last year
• wbif-bristol / ImageJ-Fiji-Level-2-course
  Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…
  ☆12Updated 2 years ago
• rosalindfranklininstitute / RedLionfish
  ☆28Updated 5 months ago
• aelefebv / Mitometer
  Automated mitochondrial segmentation and tracking.
  ☆27Updated 3 years ago
• guiwitz / microfilm
  Creating figures and animations for multi-channel images with a focus on microscopy.
  ☆63Updated 2 years ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆44Updated this week
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆17Updated 2 weeks ago
• CellMigrationLab / CellTracksColab
  A platform for compiling, analyzing, and exploring tracking data
  ☆37Updated last month
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆45Updated this week
• weigertlab / spotiflow
  Accurate and efficient spot detection for microscopy data
  ☆51Updated last week
• qnano / drift-estimation
  Drift estimation
  ☆14Updated 11 months ago
• Jhsmit / ColiCoords
  Single-cell fluorescence microscopy data analysis
  ☆26Updated 3 years ago
• biovoxxel / bv3dbox
  The known BioVoxxel Toolbox functions now improved for 2D and 3D images
  ☆14Updated this week
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆49Updated 2 weeks ago
• fmi-basel / LSTree
  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.
  ☆17Updated last year
• computational-cell-analytics / dl-for-micro
  Course and exercises on deep learning for microscopy image analysis
  ☆13Updated 6 months ago
• BiAPoL / PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
  PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
  ☆25Updated 3 months ago
• maurosilber / binlets
  Denoising via adaptive binning.
  ☆11Updated 2 months ago
• ariel-waisman / LabelsToROIs
  A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification
  ☆21Updated 3 years ago
• BIOP / coLoc
  A Board Game to teach co-localization analysis
  ☆11Updated last year
• CellMigrationLab / Fast4DReg
  Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…
  ☆37Updated 11 months ago