Alternatives and similar repositories for ExTrack

Users that are interested in ExTrack are comparing it to the libraries listed below

• sylvainprigent / stracking
  python library for particles tracking in 2D+t and 3D+t scientific images
  ☆15Updated last year
• miura / reproducible_bioimage_analysis
  ☆14Updated 4 years ago
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated 10 months ago
• CellMigrationLab / CellTracksColab
  A platform for compiling, analyzing, and exploring tracking data
  ☆46Updated 4 months ago
• trackmate-sc / TrackMate
  TrackMate is your buddy for your everyday tracking.
  ☆199Updated this week
• tinevez / msdanalyzer
  A MATLAB class for Mean Square Displacement analysis.
  ☆37Updated 4 years ago
• Jhsmit / ColiCoords
  Single-cell fluorescence microscopy data analysis
  ☆26Updated 3 years ago
• tlambert03 / FPbase
  The Fluorescent Protein Database
  ☆69Updated last week
• haesleinhuepf / devbio-napari
  ☆51Updated 2 months ago
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated last week
• AFM-SPM / TopoStats
  An AFM image analysis program to batch process data and obtain statistics from images
  ☆73Updated this week
• computational-cell-analytics / dl-for-micro
  Course and exercises on deep learning for microscopy image analysis
  ☆19Updated last month
• guiwitz / microfilm
  Creating figures and animations for multi-channel images with a focus on microscopy.
  ☆77Updated 7 months ago
• UU-cellbiology / DoM_Utrecht
  Detection of Molecules plugin for ImageJ, Utrecht University
  ☆15Updated 2 years ago
• kreshuklab / go-nuclear
  Guides and code for 3D nuclear instance segmentation
  ☆22Updated 3 weeks ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆87Updated this week
• True-North-Intelligent-Algorithms / tnia-python
  A collection of useful python utilities from True North Intelligent Algorithms
  ☆38Updated last week
• rosalindfranklininstitute / RedLionfish
  ☆30Updated last year
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆75Updated last week
• wbif-bristol / ImageJ-Fiji-Level-2-course
  Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…
  ☆13Updated 3 years ago
• oanegros / MicroscopyNodes
  Loading and handling microscopy data in blender
  ☆121Updated 2 weeks ago
• ScaDS / BIDS-lecture-2024
  Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…
  ☆38Updated last year
• fmi-faim / faim-ipa
  A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)
  ☆17Updated this week
• COBA-NIH / MicroscopyForBeginnersReferenceGuide
  A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation
  ☆28Updated last month
• sofroniewn / napari-training-course
  Lectures for a napari training course
  ☆50Updated last year
• lowe-lab-ucl / arboretum
  Track and lineage visualization with btrack and Napari
  ☆45Updated 8 months ago
• haesleinhuepf / napari-skimage-regionprops
  Feature extraction for labeled objects in images using regionprops from scikit-image
  ☆50Updated 2 months ago
• HenriquesLab / DL4MicEverywhere
  Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images
  ☆80Updated 2 months ago
• qnano / drift-estimation
  Drift estimation
  ☆15Updated last year
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆18Updated last month