johnnytam100 / pdb2uniprotLinks
A Python script to map PDB ID + chain ID to UniProt ID.
☆17Updated last year
Alternatives and similar repositories for pdb2uniprot
Users that are interested in pdb2uniprot are comparing it to the libraries listed below
Sorting:
- Set of useful HADDOCK utility scripts☆55Updated 2 months ago
- PyDock Tutorial☆34Updated 7 years ago
- Graph Network for protein-protein interface including language model features☆33Updated last year
- AlphaFold-initiated replica exchange protein docking☆84Updated 5 months ago
- Machine learning-driven antibody design☆60Updated 2 years ago
- An open-source library for the analysis of protein interactions.☆32Updated 3 years ago
- ☆54Updated 3 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆61Updated 4 months ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆37Updated 5 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆70Updated 3 weeks ago
- ☆45Updated 7 months ago
- Python package to manage protein structures and their annotations☆44Updated last year
- Tools for annotation, processing and ML for antibody sequences☆33Updated last week
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆45Updated last year
- Python package to atom map, correct and suggest enzymatic reactions☆39Updated last year
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆26Updated 4 months ago
- Transformer Based Language Model for Peptide Property Prediction☆48Updated last year
- Efficient manipulation of protein structures in Python☆60Updated last month
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆108Updated last month
- pqsar2cpd is a deep learning algorithm for translation of activity profiles into novel molecules.☆30Updated 2 years ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆29Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- pyFoldX: python bindings for FoldX.☆51Updated 4 years ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- an integrated tool for molecular docking and virtual screening☆74Updated 5 months ago
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆19Updated 9 months ago
- An analysis of a new experimentally-derived nucleic acid binding chemical library☆26Updated 2 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆42Updated 5 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- RosettaDesign using PyRosetta☆33Updated 6 years ago