PrePATH: A parallel toolkit for Preprocessing WSI
☆52Mar 27, 2026Updated 3 months ago
Alternatives and similar repositories for PrePATH
Users that are interested in PrePATH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆27Dec 19, 2025Updated 7 months ago
- The official implementation of GPFM☆128Mar 11, 2026Updated 4 months ago
- An integrated Pathology Image (a.k.a. Whole-slide image) reading library.☆76Jun 24, 2026Updated 3 weeks ago
- A toolkit for computational pathology analysis including cancer subtyping, survial analysis, report generation, and biomark prediction.☆21Jan 19, 2025Updated last year
- The official repo of "A Multimodal Knowledge-enhanced Whole-slide Pathology Foundation Model"☆53May 1, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Pathology Foundation Models Meet Semantic Segmentation☆43May 10, 2026Updated 2 months ago
- COntrastive Biomarker Representation Alignment (COBRA) [CVPR25]☆22Oct 1, 2025Updated 9 months ago
- ☆18Mar 30, 2025Updated last year
- [MICCAI 2024] Official Repo of "HistGen: Histopathology Report Generation via Local-Global Feature Encoding and Cross-modal Context Inter…☆85Dec 23, 2024Updated last year
- Code of "Multimodal Deep Learning for Cancer Prognosis Prediction with Clinical Information Prompts Integration"☆19Aug 1, 2025Updated 11 months ago
- Toolkit for large-scale whole-slide image processing.☆602Updated this week
- [npj Digital Medicine'24] Aligning Knowledge Concepts to Whole Slide Images for Precise Histopathology Image Analysis☆36Jan 7, 2025Updated last year
- [MICCAI 2024] Official Code for "MambaMIL: Enhancing Long Sequence Modeling with Sequence Reordering in Computational Pathology"☆120Apr 22, 2025Updated last year
- Official repository for PLISM robustness benchmark of pathology foundation models (MICCAI 2025)☆22Jul 7, 2026Updated 2 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆52May 19, 2025Updated last year
- Benchmark for pathology foundation models robustness to non-biological medical center differences.☆31Apr 2, 2026Updated 3 months ago
- Standardized benchmark for computational pathology foundation models.☆152Nov 7, 2025Updated 8 months ago
- [Cancer Cell, 2026] The official codes for "A Knowledge-enhanced Pathology Vision-language Foundation Model for Cancer Diagnosis"☆65Apr 17, 2026Updated 3 months ago
- ☆84May 18, 2025Updated last year
- [ICLR 2024]Implementation of "Prototypical Information Bottlenecking and Disentangling for Multimodal Cancer Survival Prediction"☆84May 5, 2024Updated 2 years ago
- ☆239Oct 26, 2025Updated 8 months ago
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆153Feb 5, 2026Updated 5 months ago
- ☆26Jun 5, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Multimodal Whole Slide Foundation Model for Pathology - Nature Medicine☆356Dec 13, 2025Updated 7 months ago
- ☆20Jul 15, 2022Updated 4 years ago
- TCGA Pathology Reports in Machine Readable Text☆65May 30, 2024Updated 2 years ago
- Here is the official implementation of the paper "Cross-Modal Translation and Alignment for Survival Analysis"☆65Apr 21, 2024Updated 2 years ago
- PyTorch implementation of HisToGene☆57Nov 30, 2021Updated 4 years ago
- Ensemble Learning of Foundation Models☆18Aug 29, 2025Updated 10 months ago
- ☆23Aug 17, 2025Updated 11 months ago
- [TMI2023] Context Label Learning: Improving Background Class Representations in Semantic Segmentation.☆19Jan 23, 2024Updated 2 years ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆23Jun 14, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆26Jun 11, 2026Updated last month
- [NeurIPS 2025] Few-Shot Learning from Gigapixel Images via Hierarchical Vision-Language Alignment and Modeling☆25May 20, 2026Updated 2 months ago
- STPath: A Generative Foundation Model for Integrating Spatial Transcriptomics and Whole Slide Images☆53Jul 27, 2025Updated 11 months ago
- NOVA: An agentic framework for automated histopathology analysis and discovery☆28May 5, 2026Updated 2 months ago
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Oct 13, 2023Updated 2 years ago
- ☆30Oct 8, 2024Updated last year
- [IEEE TMI 2025] Code for MSCPT☆38Nov 25, 2025Updated 7 months ago