PrePATH: A parallel toolkit for Preprocessing WSI
☆58Mar 27, 2026Updated 6 months ago
Alternatives and similar repositories for PrePATH
Users that are interested in PrePATH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆29Dec 19, 2025Updated 9 months ago
- The official implementation of GPFM☆132Mar 11, 2026Updated 6 months ago
- An integrated Pathology Image (a.k.a. Whole-slide image) reading library.☆83Sep 29, 2026Updated last week
- A toolkit for computational pathology analysis including cancer subtyping, survial analysis, report generation, and biomark prediction.☆21Jan 19, 2025Updated last year
- The official repo of "A Multimodal Knowledge-enhanced Whole-slide Pathology Foundation Model"☆53May 1, 2026Updated 5 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆19Mar 30, 2025Updated last year
- Pathology Foundation Models Meet Semantic Segmentation☆49Aug 12, 2026Updated last month
- COntrastive Biomarker Representation Alignment (COBRA) [CVPR25]☆21Oct 1, 2025Updated last year
- [MICCAI 2024] Official Repo of "HistGen: Histopathology Report Generation via Local-Global Feature Encoding and Cross-modal Context Inter…☆85Dec 23, 2024Updated last year
- Code of "Multimodal Deep Learning for Cancer Prognosis Prediction with Clinical Information Prompts Integration"☆21Aug 1, 2025Updated last year
- [npj Digital Medicine'24] Aligning Knowledge Concepts to Whole Slide Images for Precise Histopathology Image Analysis☆36Jan 7, 2025Updated last year
- Toolkit for large-scale whole-slide image processing.☆641Sep 15, 2026Updated 3 weeks ago
- [MICCAI 2024] Official Code for "MambaMIL: Enhancing Long Sequence Modeling with Sequence Reordering in Computational Pathology"☆121Apr 22, 2025Updated last year
- Official repository for PLISM robustness benchmark of pathology foundation models (MICCAI 2025)☆24Jul 7, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆247Oct 26, 2025Updated 11 months ago
- Benchmark for pathology foundation models robustness to non-biological medical center differences.☆33Sep 16, 2026Updated 3 weeks ago
- [NeurIPS'24] Free Lunch in Pathology Foundation Model: Task-specific Model Adaptation with Concept-Guided Feature Enhancement - NeurIPS 2…☆16Nov 19, 2024Updated last year
- Standardized benchmark for computational pathology foundation models.☆157Nov 7, 2025Updated 11 months ago
- [Cancer Cell, 2026] The official codes for "A Knowledge-enhanced Pathology Vision-language Foundation Model for Cancer Diagnosis"☆70Apr 17, 2026Updated 5 months ago
- ☆85May 18, 2025Updated last year
- PathBench-MIL: A comprehensive, flexible Benchmarking / AutoML framework for multiple instance learning in Histopathology☆29Jul 14, 2026Updated 2 months ago
- [ICLR 2024]Implementation of "Prototypical Information Bottlenecking and Disentangling for Multimodal Cancer Survival Prediction"☆85May 5, 2024Updated 2 years ago
- ☆53May 19, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆158Feb 5, 2026Updated 8 months ago
- Multimodal Whole Slide Foundation Model for Pathology - Nature Medicine☆371Dec 13, 2025Updated 9 months ago
- ☆28Jun 5, 2025Updated last year
- TCGA Pathology Reports in Machine Readable Text☆67May 30, 2024Updated 2 years ago
- ☆20Jul 15, 2022Updated 4 years ago
- BEiT-based model Pre-training on Histopathological image☆79Mar 24, 2025Updated last year
- Here is the official implementation of the paper "Cross-Modal Translation and Alignment for Survival Analysis"☆65Apr 21, 2024Updated 2 years ago
- ☆22Aug 17, 2025Updated last year
- Ensemble Learning of Foundation Models☆25Aug 20, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- [TMI2023] Context Label Learning: Improving Background Class Representations in Semantic Segmentation.☆18Jan 23, 2024Updated 2 years ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆23Jun 14, 2022Updated 4 years ago
- Awesome papers & datasets specifically focused on pathology.☆88Sep 2, 2026Updated last month
- [Nature Biomedical Engineering 2026] An Explainable Biomedical Foundation Model via Large-Scale Concept-Enhanced Vision-Language Pre-trai…☆56Sep 28, 2026Updated last week
- STPath: A Generative Foundation Model for Integrating Spatial Transcriptomics and Whole Slide Images☆53Jul 27, 2025Updated last year
- NOVA: An agentic framework for automated histopathology analysis and discovery☆29Aug 24, 2026Updated last month
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Oct 13, 2023Updated 2 years ago