Alternatives and similar repositories for WTF-Bioinformatics:

Users that are interested in WTF-Bioinformatics are comparing it to the libraries listed below

• ysuzukilab / Cibersortx
  Repository for Cibersortx
  ☆58Updated 4 years ago
• Core-Bioinformatics / MASLD-NASH
  scripts associated with NAFLD-NASH project
  ☆20Updated 11 months ago
• jasonHKU0907 / proteome-phenome-atlas
  ☆51Updated 2 months ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆34Updated 4 years ago
• hamidghaedi / scRNA_seq-analysis
  scRNA analysis of public dataset on bladder cancer
  ☆16Updated last year
• KChen-lab / METAFlux
  ☆62Updated 9 months ago
• tanlabcode / spatial-bonemarrow-atlas
  This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…
  ☆75Updated 6 months ago
• youqiongye / CRC_scRNAseq
  ☆45Updated 3 years ago
• RegnerM2015 / scENDO_scOVAR_2020
  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…
  ☆41Updated last year
• lanagarmire / Asgard
  ☆42Updated last year
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆46Updated 3 years ago
• 123anjuan / HMA
  Human Muscle Ageing Cell Atlas
  ☆16Updated last year
• FredHutch / Galeano-Nino-Bullman-Intratumoral-Microbiota_2022
  Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022
  ☆37Updated last year
• ImmucanWP7 / immucan-scdb
  ☆16Updated last year
• sajuukLyu / Protocols-4pub
  Multi-omics analysis protocols by Lyu.
  ☆51Updated last year
• winstonbecker / scCRC_continuum
  ☆40Updated 2 years ago
• zhengtaoxiao / Single-Cell-Metabolic-Landscape
  Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data
  ☆22Updated 3 years ago
• genecell / COSG
  Accurate and fast cell marker gene identification with COSG
  ☆44Updated last month
• NBISweden / single-cell_sib_scilifelab_2021
  SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/
  ☆23Updated 3 years ago
• IzarLab / CUIMC-NYP_COVID_autopsy_lung
  ☆42Updated 3 years ago
• yuyang3 / pan-B
  These are scripts for pan-cacner B cells analyses.
  ☆49Updated 9 months ago
• Lan-lab / sc-GC
  ☆30Updated 2 years ago
• MGI-tech-bioinformatics / DNBelab_C_Series_scRNA-analysis-software
  An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.
  ☆28Updated 2 years ago
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated this week
• navinlabcode / HumanBreastCellAtlas
  Repository for codes for the HBCA paper
  ☆36Updated 2 years ago
• kevlitchfield1 / CPI1000_paper
  ☆20Updated 4 years ago
• bei-lab / scRNA-AHCA
  Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs
  ☆39Updated last year
• yqq-chen / CRC_ICB
  ☆29Updated last year
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆55Updated 5 months ago
• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆66Updated last year