janelia-flyem / diced

Related projects ⓘ

Alternatives and complementary repositories for diced

• funkey / nyroglancer
  jupyter notebook extension to visualize numpy arrays with the neuroglancer
  ☆28Updated 6 years ago
• CAVEconnectome / PyChunkedGraph
  Data backend for fast proofreading of cell segmentations in connectomics datasets
  ☆23Updated last month
• imjoy-team / imjoy-rpc
  The RPC library used in ImJoy.
  ☆23Updated 3 months ago
• imglib / imglyb
  Connecting Java/ImgLib2 + Python/NumPy
  ☆31Updated last month
• JaneliaSciComp / VVDViewer
  3D/4D volumetric rendering of microscopy data
  ☆20Updated 3 weeks ago
• jhuapl-boss / intern
  Python SDK for interacting with the BossDB REST API
  ☆21Updated last week
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 3 years ago
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆27Updated last week
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated last year
• constantinpape / heimdall
  Python based viewer for large mulit-dimensional datasets.
  ☆20Updated 4 years ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆77Updated last month
• CAVEconnectome / nglui
  ☆10Updated last week
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆21Updated last year
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆24Updated this week
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆32Updated last month
• seung-lab / neuroglancer
  WebGL-based viewer for volumetric data
  ☆22Updated this week
• jni / zarpaint
  Paint segmentations directly to on-disk/remote zarr arrays
  ☆14Updated 4 months ago
• clij / clij-docs
  Online documentation and reference for CLIJ
  ☆28Updated 3 years ago
• haesleinhuepf / napari-script-editor
  A python script editor plugin for napari
  ☆11Updated last year
• haesleinhuepf / natari
  Napari gaming
  ☆16Updated 2 years ago
• seung-lab / igneous
  Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
  ☆44Updated this week
• ome / ome2024-ngff-challenge
  Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data
  ☆13Updated last week
• JaneliaSciComp / xarray-multiscale
  scalable multiscale image pyramids in python
  ☆26Updated 3 months ago
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 3 years ago
• VolkerH / NapariPlayground
  my first baby steps with Napari
  ☆10Updated 4 years ago
• CAVEconnectome / MeshParty
  ☆34Updated last month
• kirchhausenlab / incasem
  Automated Segmentation of cellular substructures in Electron Microscopy
  ☆16Updated 2 weeks ago
• allen-cell-animated / agave
  ☆35Updated this week
• thewtex / ngff-zarr
  A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.
  ☆21Updated 2 months ago
• imaris / ImarisWriter
  ☆31Updated 6 months ago