C++ Implementation of Zip Trees
β14Nov 5, 2022Updated 3 years ago
Alternatives and similar repositories for zip-tree
Users that are interested in zip-tree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implementation of eBWT using Prefix-free parse (PFP)β14Jul 14, 2025Updated last year
- π³ A compressed rank/select dictionary exploiting approximate linearity and repetitiveness.β15Jun 28, 2022Updated 4 years ago
- Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]β11Mar 6, 2024Updated 2 years ago
- R-Index-F Library for Pattern Matchingβ12Aug 8, 2024Updated 2 years ago
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.β14May 11, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- β12Oct 15, 2023Updated 3 years ago
- Optimal partitioning of Variable-Byte codes for better compression and fast decoding.β17Nov 10, 2021Updated 4 years ago
- Space-Efficient, High-Performance Rank & Select Structures on Uncompressed Bit Sequencesβ15Aug 7, 2018Updated 8 years ago
- run-length BWT tools for genomic sequencesβ18May 19, 2022Updated 4 years ago
- Paper Collection for Stringologistsβ17Updated this week
- The LaTeX and BibTeX source for my curriculum vitaeβ11Mar 11, 2025Updated last year
- Efficient Prefix-Sum data structures in C++.β28Oct 1, 2023Updated 3 years ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filtersβ23Apr 1, 2019Updated 7 years ago
- Minimum Bait Cover Toolkit Syotti.β15Jan 22, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A flexible and efficient C++ implementation of the Binary Interpolative Coding algorithm.β31Jan 8, 2023Updated 3 years ago
- CLI utilty to work out proper constants for vpternlogic instructionβ13Jan 22, 2023Updated 3 years ago
- Lift-over alignments from variant-aware referencesβ34Mar 4, 2023Updated 3 years ago
- Dynamic succinct/compressed data structuresβ120Dec 17, 2025Updated 10 months ago
- β10Sep 28, 2026Updated last month
- modular k-mer count matrix and Bloom filter construction for large read collectionsβ90Sep 18, 2026Updated last month
- AnchorHash - A Scalable Consistent Hashβ28Dec 5, 2021Updated 4 years ago
- mGEMS Genomic epidemiology with mixed samplesβ18Sep 4, 2024Updated 2 years ago
- β26Jul 1, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- π 𧬠SSHash is a compressed, associative, exact, and weighted dictionary for k-mers.β108Oct 24, 2026Updated last week
- External memory suffix array construction using inducingβ12Jul 27, 2020Updated 6 years ago
- Collection of Suffix Array Construction Algorithms (SACAs)β36Mar 29, 2019Updated 7 years ago
- A handy CLI tool for bulk-sending emailsβ17Mar 6, 2025Updated last year
- Boost.Mustacheβ10Jan 31, 2023Updated 3 years ago
- evaluating vcf parsing librariesβ19Mar 1, 2022Updated 4 years ago
- GPU-Accelerated Faster Decoding of Integer Listsβ13Aug 20, 2019Updated 7 years ago
- β13Jun 2, 2024Updated 2 years ago
- GBZ file format for pangenome graphsβ47Sep 14, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Cython wrappers for Google's sparsehash library, and the murmur hash functionsβ18Jul 24, 2014Updated 12 years ago
- Example to read qr code with kotlinβ10Jul 24, 2018Updated 8 years ago
- A four-dimensional Analysis of Partitioned Approximate Filtersβ11Aug 6, 2025Updated last year
- Wavelet tree based on a fixed block boosting techniqueβ17May 18, 2021Updated 5 years ago
- AVX-2 vectorised 8-bit positional popcount for Goβ23Aug 28, 2020Updated 6 years ago
- A monolithic index that supports worst-case optimal joins (WCOJ) by providing all collation orders in a single redundancy eliminating datβ¦β18Sep 2, 2026Updated 2 months ago
- β24Feb 22, 2023Updated 3 years ago