epnev / continuous_time_ca_samplerLinks
The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underlying spike in continuous time.
☆20Updated 8 years ago
Alternatives and similar repositories for continuous_time_ca_sampler
Users that are interested in continuous_time_ca_sampler are comparing it to the libraries listed below
Sorting:
- benchmarking challenge for finding neurons in imaging data☆74Updated 6 years ago
- A virtual optogenetics laboratory☆39Updated 2 years ago
- Implementation of the constrained deconvolution spike inference algorithm in Matlab☆13Updated 9 years ago
- Deconvolution of calcium imaging data☆100Updated 8 months ago
- Adaptive Platform for Neuroscience Experiments☆41Updated last week
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- Database for experimental neuroscience laboratories☆49Updated 2 weeks ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- Single photon tools for Neuroscience☆36Updated last year
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- neuroConstruct: biophysically detailed neuronal modelling in 3D☆52Updated 7 months ago
- SpikeForest -- spike sorting analysis for website☆16Updated 5 years ago
- Repository for collecting materials from nwb hackathons☆24Updated 4 months ago
- Distributed behavioral experiments☆95Updated 7 months ago
- YASS: Yet Another Spike Sorter☆70Updated 3 years ago
- ☆22Updated 11 months ago
- Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning☆15Updated 3 years ago
- Main repository for IBL rig code☆22Updated this week
- Electrophys Feature Extraction Library☆73Updated 7 months ago
- NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.☆32Updated 5 years ago
- Complete Matlab pipeline for large scale calcium imaging data analysis☆258Updated 2 years ago
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- Python-based module with spike sorter wrappers and a simple API for running them.☆20Updated 4 years ago
- Python package for analysis of dynamic fluorescence microscopy data☆102Updated 6 years ago
- Fast Exact Spike Inference Via L0 Optimization☆15Updated 5 years ago
- Tools for processing 2P recordings☆128Updated last year
- Tools for spike data analysis and visualization☆108Updated 2 years ago
- Neuroscience information exchange format☆70Updated 2 years ago
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆18Updated 8 years ago
- Blazing fast calcium imaging analysis toolbox☆22Updated 8 years ago