The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underlying spike in continuous time.
☆20Oct 21, 2016Updated 9 years ago
Alternatives and similar repositories for continuous_time_ca_sampler
Users that are interested in continuous_time_ca_sampler are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implementation of the constrained deconvolution spike inference algorithm in Matlab☆13Dec 20, 2015Updated 10 years ago
- Automatic ROI Detection☆19Nov 10, 2015Updated 10 years ago
- Blazing fast calcium imaging analysis toolbox☆21Jun 20, 2017Updated 8 years ago
- up-to-date code for model-based inference of spike trains from calcium imaging☆24Apr 16, 2018Updated 8 years ago
- Complete Matlab pipeline for large scale calcium imaging data analysis☆261Jul 4, 2023Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- spike extraction from calcium signals (Deneux et al., 2016)☆36Apr 9, 2020Updated 6 years ago
- Region Of Interest Classification and Tracking☆33Updated this week
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆722Apr 16, 2026Updated 2 weeks ago
- This repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Proce…☆18Apr 22, 2026Updated last week
- An implementation of Frank Karsten's deck aggregation algorithm described here: http://www.channelfireball.com/articles/magic-math-a-new-…☆12Mar 13, 2018Updated 8 years ago
- Fast approximate inference for Poisson GLMs☆11Oct 20, 2019Updated 6 years ago
- ☆12May 16, 2019Updated 6 years ago
- ☆14Mar 10, 2021Updated 5 years ago
- Simple single neuron simulations in Julia☆10May 31, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Fast Exact Spike Inference Via L0 Optimization☆15Jun 10, 2020Updated 5 years ago
- ☆14Oct 29, 2018Updated 7 years ago
- A Deep Architecture for Synapse Detection in Multiplexed Fluorescence Images☆14May 28, 2019Updated 6 years ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆157May 29, 2022Updated 3 years ago
- Schemata and libraries for neuroscientific data☆33Sep 17, 2025Updated 7 months ago
- Demographic bias in misdiagnosis by computational pathology models - Nature Medicine☆14Apr 29, 2024Updated 2 years ago
- BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of …☆13Jun 3, 2025Updated 10 months ago
- A library of fast s-t graph cut algorithms for Python.☆11Feb 9, 2024Updated 2 years ago
- Modified version of QPBO algorithm by Vladimir Kolmogorov for very large graphs.☆11Dec 14, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A macOS app for running a Jupyter notebook directly from Finder's current folder☆41Sep 11, 2017Updated 8 years ago
- Optimization of single-cell biophysically detailed models☆15Jul 17, 2020Updated 5 years ago
- A Graphical User Interface with 3D Visualization features for NEURON simulation enviroment☆30Mar 30, 2026Updated 3 weeks ago
- Relational data pipelines for the science lab☆42Jul 14, 2023Updated 2 years ago
- Some python functions to supplement the NEURON python module☆28Jun 25, 2019Updated 6 years ago
- Time-Frequency Analysis☆21Feb 26, 2018Updated 8 years ago
- ☆10May 9, 2015Updated 10 years ago
- ☆43Sep 29, 2021Updated 4 years ago
- Deprecated in favor of MultivariateStats.jl☆27Sep 13, 2014Updated 11 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Variance pooling to incorporate ITH in CPath models - MICCAI 2022☆26Sep 27, 2022Updated 3 years ago
- Biomedical Image Analysis Library☆10May 17, 2019Updated 6 years ago
- library for diffing and transforming json objects☆16Jun 16, 2014Updated 11 years ago
- Data set of APESS2018 for one of the final projects - Steel Girder Crack Identification☆12Oct 15, 2018Updated 7 years ago
- [UNMAINTAINED] XPPy is Python interface for Bard Ermentrout's XPP.☆31Aug 29, 2022Updated 3 years ago
- Minimize messaging between computers in a distributed computing system by using the LeapHybridCQMSampler. This problem is also known as t…☆18Feb 27, 2026Updated 2 months ago
- ☆20Aug 17, 2020Updated 5 years ago