The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underlying spike in continuous time.
☆20Oct 21, 2016Updated 9 years ago
Alternatives and similar repositories for continuous_time_ca_sampler
Users that are interested in continuous_time_ca_sampler are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implementation of the constrained deconvolution spike inference algorithm in Matlab☆13Dec 20, 2015Updated 10 years ago
- Automatic ROI Detection☆19Nov 10, 2015Updated 10 years ago
- Blazing fast calcium imaging analysis toolbox☆21Jun 20, 2017Updated 8 years ago
- Complete Matlab pipeline for large scale calcium imaging data analysis☆261Jul 4, 2023Updated 2 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆36Apr 9, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Lab Book Database Framework with Input, Output, and Reporting Functions☆14Jul 18, 2022Updated 3 years ago
- Region Of Interest Classification and Tracking☆33May 12, 2026Updated last week
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆721Apr 16, 2026Updated last month
- This repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Proce…☆20Updated this week
- An implementation of Frank Karsten's deck aggregation algorithm described here: http://www.channelfireball.com/articles/magic-math-a-new-…☆12Mar 13, 2018Updated 8 years ago
- Fast approximate inference for Poisson GLMs☆11Oct 20, 2019Updated 6 years ago
- ☆14Mar 10, 2021Updated 5 years ago
- a repository containing everything relevant to our fast non-negative deconvolution work☆35Nov 28, 2016Updated 9 years ago
- Simple single neuron simulations in Julia☆10May 31, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Fast Exact Spike Inference Via L0 Optimization☆15Jun 10, 2020Updated 5 years ago
- Schemata and libraries for neuroscientific data☆35Sep 17, 2025Updated 8 months ago
- BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of …☆13Jun 3, 2025Updated 11 months ago
- Modified version of QPBO algorithm by Vladimir Kolmogorov for very large graphs.☆11Dec 14, 2018Updated 7 years ago
- A macOS app for running a Jupyter notebook directly from Finder's current folder☆41Sep 11, 2017Updated 8 years ago
- A Graphical User Interface with 3D Visualization features for NEURON simulation enviroment☆30Mar 30, 2026Updated last month
- Relational data pipelines for the science lab☆42Updated this week
- COSMOSS is a Coupled OScillator MOdel Spectrum Simulator☆10Jun 20, 2021Updated 4 years ago
- TensorFlow examples☆23May 10, 2017Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Some python functions to supplement the NEURON python module☆28Jun 25, 2019Updated 6 years ago
- Project repo for gpSLDS☆19Jan 12, 2026Updated 4 months ago
- A customizable visual prompt tool in the form of a screen overlay to facilitate breathwork practice☆35May 12, 2026Updated last week
- ☆42Sep 29, 2021Updated 4 years ago
- Deprecated in favor of MultivariateStats.jl☆27Sep 13, 2014Updated 11 years ago
- Biomedical Image Analysis Library☆10May 17, 2019Updated 7 years ago
- Conditional Linear Dynamical Systems☆17Oct 7, 2025Updated 7 months ago
- Data set of APESS2018 for one of the final projects - Steel Girder Crack Identification☆12Oct 15, 2018Updated 7 years ago
- [UNMAINTAINED] XPPy is Python interface for Bard Ermentrout's XPP.☆31Aug 29, 2022Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This template repository provides the boilerplate and file structure required to easily create your own PennyLane plugin.☆11Sep 16, 2020Updated 5 years ago
- An interactive image processing program for biologists written in Python.☆26Mar 4, 2026Updated 2 months ago
- ManifoldEM Python suite☆17Nov 22, 2024Updated last year
- A universal static type checking solution for use in flow-based-programming systems☆12Aug 30, 2017Updated 8 years ago
- CLI tool that counts how many lines per second is written to it☆18Jul 31, 2019Updated 6 years ago
- Theoretical ROVibrational Energies: A variational program for accurate nuclear motion calculations☆18May 11, 2026Updated last week
- Kind of like GraphQL except for Javascript objects. Extracts and optionally transforms sub-objects from Javascript objects.☆11Sep 13, 2018Updated 7 years ago