arogozhnikov / rtg_scoreLinks
Rank-To-Group score evaluates contribution of confounding factors
☆21Updated 3 years ago
Alternatives and similar repositories for rtg_score
Users that are interested in rtg_score are comparing it to the libraries listed below
Sorting:
- Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing☆24Updated 10 months ago
- generalized principal component analysis (GLM-PCA) implemented in python☆60Updated 4 years ago
- Bayesian Factorization with Side Information in C++ with Python wrapper☆41Updated 3 years ago
- Python Wrapper for FIt-SNE☆45Updated 4 years ago
- Tools for building and manipulating graphs in Python☆41Updated this week
- Semi-Supervised t-SNE using a Bayesian prior based on partial labelling☆42Updated 8 years ago
- Tools for munging genomic data☆21Updated 5 years ago
- Implementation of Fibered Auto-Encoders☆9Updated 4 years ago
- A pedagogical, functional-oriented deep learning library built on top of jax.☆15Updated 3 years ago
- Examples using Clustergrammer2 to explore high-dimensional datasets.☆40Updated 4 years ago
- Disease pathways in the human interactome☆23Updated 7 years ago
- Here I explain the math behind UMAP and show how to program it from scratch in Python☆38Updated 4 years ago
- Python framework for multi-parameter optimization and evaluation of protein folding models☆17Updated 4 years ago
- Latent spaces for single cells☆21Updated last year
- Fast embedding ot multidimensional datasets, great for cytometry data☆26Updated 4 months ago
- ☆19Updated 2 years ago
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆17Updated last year
- Amino-Acid Sequence Annotation Predictor (ASAP)☆25Updated 5 years ago
- Machine learning framework for predicting the responses of drug combinations in pre-clinical studies, such as those based on cell lines o…☆26Updated 4 years ago
- Universal Transforming Geometric Network for protein structure prediction.☆8Updated 4 years ago
- A Library for Denoising Single-Cell Data with Random Matrix Theory☆37Updated last year
- Code to accompany my blog post "Dissecting the Hype With Cheminformatics"☆12Updated 5 years ago
- Here I show how to use Deep Autoencoders for single cell RNA sequencing data analysis☆19Updated 6 years ago
- The starter repository for submissions to the GeneDisco challenge for optimized experimental design in genetic perturbation experiments.☆24Updated 3 years ago
- Integrative orthogonal non-negative matrix factorization☆31Updated 5 years ago
- CS273B Deep Learning for Genomics Course Materials☆33Updated 4 years ago
- Sequence data label generation and ingestion into deep learning models☆12Updated 3 years ago
- A library to simulate single-cell data☆2Updated 2 years ago
- Here we address the global structure preservation by tSNE and UMAP☆48Updated 5 years ago
- An experimental deep learning & genotype network-based system for predicting new influenza protein sequences.☆37Updated last year