heathcliff233 / fastMSALinks
☆13Updated 4 years ago
Alternatives and similar repositories for fastMSA
Users that are interested in fastMSA are comparing it to the libraries listed below
Sorting:
- ☆21Updated 3 years ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Updated 2 years ago
- ☆33Updated last year
- ☆15Updated last year
- Reaction-Conditioned Virtual Screening of Enzymes☆42Updated 8 months ago
- Code and Pre-Trained Models for "AttnPacker: An end-to-end deep learning method for protein side-chain packing"☆91Updated 2 years ago
- Calculate the RMSD between two protein structures☆12Updated 3 years ago
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆13Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆108Updated 2 weeks ago
- ☆91Updated 3 years ago
- Open source code for AlphaFold.☆38Updated 3 years ago
- PoseX: A Molecular Docking Benchmark☆66Updated 7 months ago
- Structure-Informed Protein Language Model☆38Updated last year
- ☆38Updated 3 weeks ago
- ☆32Updated last year
- ☆25Updated last year
- ☆23Updated 8 months ago
- Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction☆35Updated 2 years ago
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Updated 2 years ago
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Updated 5 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆57Updated last month
- Structure-conditioned masked language modeling for protein sequence design☆70Updated 2 years ago
- ☆52Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆61Updated 8 months ago
- Making Protein folding accessible to all!☆25Updated 2 years ago
- Comprehensive Benchmark for Protein-Peptide Complex Structure Prediction with AlphaFold3☆19Updated 5 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆82Updated 8 months ago
- Protein generative model conditioned on Gene Ontology terms☆35Updated 3 years ago
- DLPacker☆32Updated last year
- ☆41Updated 2 years ago