Alternatives and similar repositories for napari-filaments

Users that are interested in napari-filaments are comparing it to the libraries listed below

• bigdataprocessor / bigdataprocessor2
  ☆21Updated last week
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆33Updated 3 weeks ago
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated last week
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 10 months ago
• multiview-stitcher / napari-stitcher
  A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
  ☆16Updated last week
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• morphometrics / morphometrics
  ☆22Updated last year
• rosalindfranklininstitute / RedLionfish
  ☆30Updated last year
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 6 months ago
• imagej / napari-imagej
  Use ImageJ functionality from napari
  ☆31Updated 3 months ago
• COSC-Lab / napari-fast4dreg
  dask empowered fast4dreg
  ☆11Updated 7 months ago
• imaris / ImarisWriter
  ☆37Updated last year
• COBA-NIH / MicroscopyForBeginnersReferenceGuide
  A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation
  ☆28Updated last month
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated 2 years ago
• czbiohub-sf / iohub
  Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
  ☆38Updated this week
• fmi-faim / faim-ipa
  A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)
  ☆17Updated last week
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆65Updated last week
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated last week
• PRNicovich / 3D-Printed-Optics-Lab-Parts
  Various parts made for fluorescence microscopy + optics work
  ☆16Updated 5 years ago
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆75Updated last week
• tlambert03 / imarispy
  Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer
  ☆12Updated 3 years ago
• ilastik / ilastik-napari
  ilastik plugin for napari
  ☆14Updated last year
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated 10 months ago
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆13Updated last week
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆21Updated 5 years ago
• haesleinhuepf / the-segmentation-game
  Gamified image segmentation quality estimation
  ☆17Updated 2 months ago
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆17Updated 2 months ago
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆26Updated last week
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆18Updated last month
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆17Updated last month