Alternatives and similar repositories for napari-filaments

Users that are interested in napari-filaments are comparing it to the libraries listed below

• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆33Updated this week
• rosalindfranklininstitute / RedLionfish
  ☆31Updated last year
• brisvag / napari-label-interpolator
  ☆12Updated last year
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 7 months ago
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated last month
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆24Updated last year
• COSC-Lab / napari-fast4dreg
  dask empowered fast4dreg
  ☆11Updated 8 months ago
• fmi-faim / faim-ipa
  A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)
  ☆17Updated this week
• imagej / napari-imagej
  Use ImageJ functionality from napari
  ☆31Updated this week
• bigdataprocessor / bigdataprocessor2
  ☆22Updated 2 weeks ago
• multiview-stitcher / napari-stitcher
  A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
  ☆16Updated last month
• hinderling / napari_pixel_classifier
  An Ilastik-like interactive pixel classifier.
  ☆16Updated 11 months ago
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆21Updated 5 years ago
• morphometrics / morphometrics
  ☆22Updated last year
• PRNicovich / 3D-Printed-Optics-Lab-Parts
  Various parts made for fluorescence microscopy + optics work
  ☆16Updated 6 years ago
• ekatrukha / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆30Updated last week
• sebi06 / napari_zeiss
  Use Napari Viewer to display CZI images
  ☆11Updated 3 years ago
• tlambert03 / imarispy
  Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer
  ☆12Updated 3 years ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 11 months ago
• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆17Updated last week
• COBA-NIH / MicroscopyForBeginnersReferenceGuide
  A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation
  ☆28Updated last week
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆18Updated last month
• hanjinliu / impy
  Speed up coding/extending image analysis in Python.
  ☆35Updated last week
• ilastik / ilastik-napari
  ilastik plugin for napari
  ☆14Updated last year
• flevet / SR-Tesseler
  ☆13Updated 5 years ago
• imaris / ImarisWriter
  ☆38Updated last year
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated 3 weeks ago
• BIOP / ijp-LaRoMe
  some useful function to get Label from ROIs and vice versa , and more!
  ☆12Updated 2 years ago
• lacan / microscopy-icons
  Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/
  ☆11Updated 2 years ago
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated last year