Tutorial for running the PredictDB pipeline with GEUVADIS data
☆15Jan 22, 2024Updated 2 years ago
Alternatives and similar repositories for PredictDB-Tutorial
Users that are interested in PredictDB-Tutorial are comparing it to the libraries listed below
Sorting:
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Aug 28, 2020Updated 5 years ago
- Manhattan++☆29Feb 13, 2024Updated 2 years ago
- ☆40Jan 13, 2026Updated last month
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 2 years ago
- My configuration files on macOS☆11Jan 27, 2026Updated last month
- software package for integrative genetic association analysis☆35Jul 8, 2023Updated 2 years ago
- Mastering Machine Learning with R, Second Edition by Packt☆39Jan 30, 2023Updated 3 years ago
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated last year
- Added functions for Echidna in R☆11Apr 14, 2023Updated 2 years ago
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Sep 1, 2022Updated 3 years ago
- user-friendly pipeline for GWAS fine-mapping☆12Mar 9, 2025Updated 11 months ago
- My personal website☆11Dec 22, 2024Updated last year
- MetaXcan software and manuscript☆188Jul 4, 2025Updated 8 months ago
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated last month
- R package that contains plink binaries for windows, mac and linux☆14Oct 14, 2019Updated 6 years ago
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 6 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- Hands-On Reinforcement Learning with R, published by Packt☆13Oct 31, 2022Updated 3 years ago
- Simple template for running snakemake with R☆12Jan 31, 2023Updated 3 years ago
- Various multi-trait association tests in R☆11Oct 30, 2018Updated 7 years ago
- R Data Mining, published by Packt☆13Jan 30, 2023Updated 3 years ago
- ☆15Mar 24, 2025Updated 11 months ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 3 years ago
- Slides for my RLadies NYC Presentation☆11Feb 27, 2020Updated 6 years ago
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆14Jun 16, 2021Updated 4 years ago
- ☆13Nov 30, 2018Updated 7 years ago
- Make LocusZoom-like plots with your own LD matrix.☆49Jul 17, 2022Updated 3 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆53Mar 6, 2025Updated 11 months ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆46Dec 16, 2024Updated last year
- All kinds of NGS analysis pipeline☆12Oct 10, 2019Updated 6 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆14Jul 2, 2025Updated 8 months ago
- Create Regional Association Plots☆13Sep 7, 2025Updated 5 months ago
- ☆20Sep 1, 2024Updated last year
- 2023年暑期托福学习资料汇总☆11Apr 23, 2024Updated last year
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- Various online & other resources for learning and improving skills in the R programming language☆15Jun 5, 2023Updated 2 years ago
- Adding random effects model to the METAL software☆15Jun 11, 2023Updated 2 years ago