Alternatives and similar repositories for microscopeimagequality

Users that are interested in microscopeimagequality are comparing it to the libraries listed below

• lmb-freiburg / Unet-Segmentation
  The U-Net Segmentation plugin for Fiji (ImageJ)
  ☆90Updated 3 years ago
• spreka / biomagdsb
  This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…
  ☆55Updated 5 years ago
• carpenterlab / unet4nuclei
  U-net based segmentation of nuclei in microscopy images
  ☆52Updated 7 years ago
• hammerlab / flowdec
  TensorFlow Deconvolution for Microscopy Data
  ☆90Updated 3 years ago
• google / in-silico-labeling
  Code for In silico labeling: Predicting fluorescent labels in unlabeled images
  ☆262Updated 5 years ago
• smithk / cidre
  A general illumination correction method for optical microscopy.
  ☆42Updated 4 years ago
• CovertLab / DeepCell
  ☆51Updated 7 years ago
• imodpasteur / ANNA-PALM
  Accelerating Single Molecule Localization Microscopy with Deep Learning
  ☆52Updated 2 years ago
• CSBDeep / CSBDeep_website
  ☆40Updated 5 years ago
• BPHO-Salk / PSSR
  Deep Learning-Based Point-Scanning Super-Resolution (PSSR)
  ☆81Updated last year
• alexxijielu / paired_cell_inpainting
  Self-supervised learning for microscopy images
  ☆55Updated 6 years ago
• AllenCellModeling / pytorch_fnet
  Three dimensional cross-modal image inference
  ☆160Updated 2 weeks ago
• AllenCellModeling / pytorch_integrated_cell
  Integrated Cell project implemented in pytorch
  ☆44Updated 2 weeks ago
• fiji / microscope-image-quality
  TensorFlow-based classifier for microscope image focus quality.
  ☆18Updated 3 years ago
• juglab / VoidSeg
  Notebooks for VoidSeg
  ☆17Updated 5 years ago
• hammerlab / cytokit
  Microscopy Image Cytometry Toolkit
  ☆114Updated 3 years ago
• CRBS / cdeep3m
  Please go to https://github.com/CRBS/cdeep3m2 for most recent version
  ☆59Updated 5 years ago
• oist / Usiigaci
  Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning
  ☆199Updated 5 years ago
• google / ffn
  Flood-Filling Networks for instance segmentation in 3d volumes.
  ☆338Updated last month
• ilastik / ilastik
  ilastik-shell, applets, and workflows to string them together.
  ☆384Updated last week
• cxhernandez / cellcount
  A Convolutional Neural Network for Segmenting and Counting Cells in Microscopy Images
  ☆60Updated 6 years ago
• CSBDeep / CSBDeep
  Image restoration for fluorescence microscopy
  ☆317Updated last year
• CellProfiler / CellProfiler-Analyst
  Open-source software for exploring and analyzing large, high-dimensional image-derived data.
  ☆164Updated 3 months ago
• usnistgov / Lineage-Mapper
  Lineage Mapper Fiji plugin and MATLAB source code
  ☆18Updated 3 years ago
• blink1073 / tifffile
  Deprecated: Read and write image data from and to TIFF files.
  ☆62Updated 6 years ago
• BiaPyX / BiaPy
  Open source Python library for building bioimage analysis pipelines
  ☆185Updated this week
• imjoy-team / ImJoy
  ImJoy: Deep Learning Made Easy!
  ☆189Updated 2 years ago
• mehta-lab / microDL
  3D virtual staining with 2D and 2.5D U-Nets
  ☆30Updated 2 years ago
• jr0th / segmentation
  Code for my master's thesis. Instance segmentation of fluorescence microscopy images with deep learning.
  ☆43Updated 7 years ago
• EliasNehme / Deep-STORM
  Official implementation of the Optica 2018 paper "Deep-STORM: super-resolution single-molecule microscopy by deep learning"
  ☆56Updated 5 years ago