alexxijielu / paired_cell_inpainting
Self-supervised learning for microscopy images
☆55Updated 5 years ago
Alternatives and similar repositories for paired_cell_inpainting:
Users that are interested in paired_cell_inpainting are comparing it to the libraries listed below
- Starter code for the CellSignal NeurIPS 2019 competition.☆45Updated 8 months ago
- Stain normalization parameters used in the paper "F. Ciompi et al., The importance of stain normalization in colorectal tissue classifica…☆28Updated 5 years ago
- Survival Convolutional Neural Networks☆68Updated 2 years ago
- U-net based segmentation of nuclei in microscopy images☆52Updated 6 years ago
- Demos for Cell Proposal Networks presented in ICIP 16 and DLMIA 16 (MICCAI-W)☆17Updated 7 years ago
- Feature Aware Normalization - Code for "Context-based Normalization of Histological Stains using Deep Convolutional Features"☆15Updated 6 years ago
- Analysis of results of the Data Science Bowl 2018☆21Updated 4 years ago
- 2018 Data Science Bowl 2nd Place Solution☆104Updated 6 years ago
- This is the source code for training and testing our three class CNN algorithm for generalized nuclei segmentation (IEEE TMI paper) using…☆53Updated 5 years ago
- ☆44Updated 6 years ago
- Kaggle Data Science Bowl 2018☆21Updated 6 years ago
- ☆63Updated 6 years ago
- ☆77Updated 4 months ago
- Codes for our MIA paper "DeepMitosis: Mitosis detection via deep detection, verification and segmentation networks".☆24Updated 5 years ago
- A Convolutional Neural Network for Segmenting and Counting Cells in Microscopy Images☆58Updated 6 years ago
- PyTorch implementation of Deep Survival Models.☆18Updated 7 years ago
- ☆49Updated 6 years ago
- ☆15Updated 7 years ago
- Supporting tools for PyTorch in biology research.☆19Updated 3 years ago
- ☆3Updated 7 years ago
- To train deep convolutional neural networks, the input data and the activations need to be kept in memory. Given the limited memory avail…☆100Updated last year
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆78Updated 2 years ago
- 7th place solution for the 2018 Data Science Bowl with a score of 0.591☆63Updated 5 years ago
- This repository contains adaptations of the state-of-the-art deep learning based object detection models for the detection of cell nuclei…☆27Updated 2 years ago
- ☆26Updated 6 years ago
- Weakly Supervised Mitosis Detection in Breast Histopathology Images using Concentric Loss☆25Updated 5 years ago
- ☆120Updated 7 years ago
- Full package for applying deep learning to virtual slides.☆68Updated 6 years ago
- This is supplementary material for the manuscript: "Semantic Segmentation of Pathological Lung Tissue with Dilated Fully Convolutional Ne…☆30Updated 7 years ago
- Segmenting WSIs using Deep Convolutional Neural Networks☆19Updated 6 years ago