Alternatives and similar repositories for elektronn3

Users that are interested in elektronn3 are comparing it to the libraries listed below

• gvtulder / elasticdeform
  Differentiable elastic deformations for N-dimensional images (Python, SciPy, NumPy, TensorFlow, PyTorch).
  ☆192Updated 7 months ago
• perslev / MultiPlanarUNet
  Multi-Planar UNet for autonomous segmentation of 3D medical images
  ☆195Updated 2 years ago
• ashawkey / volumentations
  3D volume data augmentation package inspired by albumentations
  ☆81Updated 5 years ago
• JanaLipkova / s3
  Skull stripping and brain tissue segmentation
  ☆122Updated 6 years ago
• MIC-DKFZ / RegRCNN
  This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…
  ☆51Updated 2 years ago
• ivadomed / ivadomed
  Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.
  ☆163Updated 4 months ago
• christianpayer / MedicalDataAugmentationTool
  ☆171Updated 3 years ago
• ozan-oktay / Medical-Image-Analysis-IPython-Tutorials
  ☆41Updated 7 years ago
• Project-MONAI / MONAIBootcamp2020
  Material for the 2020 MONAI Bootcamp
  ☆64Updated 4 years ago
• jcreinhold / niftidataset
  pytorch dataset class for reading and transforming NIfTI files
  ☆64Updated 3 years ago
• MGH-LMIC / windows_optimization
  Implementation of "Practical Window Setting Optimization for Medical Image Deep learning"
  ☆42Updated 5 years ago
• google-deepmind / tcia-ct-scan-dataset
  Dataset of head and neck CT scans and segmentations in NRRD format.
  ☆97Updated 5 years ago
• baumgach / PHiSeg-code
  Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019
  ☆128Updated 2 years ago
• Wuziyi616 / CFUN
  Combining Faster R-CNN and U-net for efficient medical image segmentation
  ☆146Updated 3 years ago
• zudi-lin / pytorch_connectomics
  PyTorch Connectomics: segmentation toolbox for EM connectomics
  ☆179Updated 3 months ago
• HealthML / self-supervised-3d-tasks
  ☆192Updated 3 years ago
• shijianjian / EfficientNet-PyTorch-3D
  A PyTorch implementation of EfficientNet
  ☆176Updated 2 years ago
• mrkolarik / 3D-brain-segmentation
  This is a repository containing code to Paper "Optimized High Resolution 3D Dense-U-Net Network for Brain and Spine Segmentation" publish…
  ☆219Updated 4 months ago
• junyuchen245 / Unsuprevised_Seg_via_CNN
  An unsupervised (or self-supervised) loss function for binary image segmentation (TensorFlow)
  ☆71Updated 3 years ago
• zyl200846 / 3D-UNet-PyTorch-Implementation
  The implementation of 3D-UNet using PyTorch
  ☆101Updated 7 months ago
• JunMa11 / MedUncertainty
  Uncertainty in Medical Image Analysis
  ☆317Updated 3 years ago
• rundherum / pymia
  pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis
  ☆60Updated 9 months ago
• MIC-DKFZ / basic_unet_example
  An example project of how to use a U-Net for segmentation on medical images with PyTorch.
  ☆148Updated last year
• RSIP-Vision / medio
  Medical images I/O python package
  ☆34Updated last week
• mattmacy / torchbiomed
  Datasets, Transforms and Utilities specific to Biomedical Imaging
  ☆110Updated 7 years ago
• HINTLab / ACSConv
  [IEEE JBHI'21] Reinventing 2D Convolutions for 3D Images - 1 line of code to convert pretrained 2D models to 3D!
  ☆168Updated last year
• fepegar / highresnet
  PyTorch implementation of HighRes3DNet
  ☆55Updated 2 months ago
• ZFTurbo / volumentations
  Library for 3D augmentations
  ☆255Updated 11 months ago
• HiLab-git / SimpleCRF
  matlab and python wrap of crf and dense crf, both 2d and 3d are supported
  ☆169Updated 2 years ago
• sacmehta / YNet
  Y-Net: Joint Segmentation and Classification for Diagnosis of Breast Biopsy Images
  ☆144Updated 4 years ago