uc-cdis / gen3sdk-pythonLinks
Gen3 SDK for Python
☆16Updated this week
Alternatives and similar repositories for gen3sdk-python
Users that are interested in gen3sdk-python are comparing it to the libraries listed below
Sorting:
- Python library & CLI to create, view and edit PFB files☆12Updated this week
- vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration☆40Updated last year
- Feature Annotation Location Description Ontology☆34Updated 5 years ago
- Schema and generated objects for biolink data model and upper ontology☆220Updated this week
- An app and library for building, conversion, and validation of GA4GH Phenopackets.☆16Updated 6 months ago
- Source for the HL7 Genomics work group's "Clinical Genomics-Reporting" FHIR implementation guide☆26Updated 3 weeks ago
- AmiGO is the public interface for the Gene Ontology.☆31Updated last week
- NCATS Biomedical Translator Reasoners Standard API☆40Updated this week
- A repository for the schemas used for the Data Repository Service.☆63Updated this week
- Integrated OBO ontology store☆48Updated 3 months ago
- Repository for the GA4GH phenopacket schema☆92Updated this week
- Graph-based modeling environment for biology, including prototype editor and services☆41Updated this week
- 🔥 FHIR 101 - A Practical Guide☆42Updated 5 years ago
- A PostgreSQL foreign data wrapper for VCF files.☆18Updated 8 years ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆33Updated last year
- Data Ingestion Pipeline for Monarch☆57Updated 3 years ago
- API for linked biological knowledge☆66Updated 3 years ago
- Data transformation framework for LinkML data models☆60Updated this week
- Map your disease and phenotype terms to the Open Targets platform ontology☆22Updated this week
- Ontology for consent codes and data use requirements☆67Updated 3 years ago
- Ontology Access Kit: A python library and command line application for working with ontologies☆156Updated 7 months ago
- An app store for scientific workflows, tools, notebooks, and services☆130Updated this week
- LLM-driven curation assist tool☆100Updated 2 months ago
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆27Updated 5 months ago
- Issue tracker, technical wiki, and example markup☆63Updated 3 months ago
- Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats☆49Updated 8 months ago
- A motley crew of agents developed by the Monarch Initiative☆21Updated last month
- A collection of useful python functions for looking up information and working with the Biolink Model☆24Updated 3 weeks ago
- Basic and Advanced OBO Graphs: specification and reference implementation☆68Updated 2 months ago
- SQL and SQLite builds of OWL ontologies☆55Updated 2 months ago