Alternatives and similar repositories for gdcdatamodel

Users that are interested in gdcdatamodel are comparing it to the libraries listed below

• NCI-GDC / gdcdictionary
  Data dictionary for the GDC
  ☆54Updated 2 months ago
• NCIP / gdc-docs
  Official repository for GDC User Guides in Markdown format
  ☆68Updated last year
• BioinformaticsFMRP / TCGAbiolinksGUI
  TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/
  ☆37Updated 4 years ago
• broadinstitute / gdctools
  Python and UNIX CLI utilities to simplify interaction with the NIH/NCI Genomics Data Commons
  ☆31Updated 7 years ago
• Bioconductor / GenomicDataCommons
  Provide R access to the NCI Genomic Data Commons portal.
  ☆90Updated last week
• ga4gh-beacon / specification
  GA4GH Beacon specification.
  ☆32Updated 2 years ago
• phenopolis / phenopolis
  An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data
  ☆33Updated 3 years ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• dnanexus / dx-toolkit
  DNAnexus platform client libraries
  ☆102Updated this week
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆71Updated last month
• EBISPOT / goci
  GWAS Catalog Ontology and Curation Infrastructure
  ☆26Updated 3 weeks ago
• HumanCellAtlas / metadata-schema
  This repo is for the metadata schemas associated with the HCA
  ☆68Updated this week
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆130Updated last week
• ncbi / ncbi-vdb
  ncbi-vdb
  ☆92Updated this week
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 6 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆42Updated 2 years ago
• ENCODE-DCC / encoded
  Metadata database for ENCODE project
  ☆113Updated last week
• ga4gh / tool-registry-service-schemas
  APIs for discovering genomics tools, their metadata and their containers
  ☆32Updated 2 months ago
• Nealelab / cloudtools
  Scripts for working with Google Cloud Dataproc service
  ☆37Updated 6 years ago
• verilylifesciences / variant-qc
  Quality control methods for human genomic variants.
  ☆62Updated 3 years ago
• bigdatagenomics / mango
  A scalable genome browser. Apache 2 licensed.
  ☆126Updated 2 years ago
• sbg / sevenbridges-python
  SevenBridges Python Api bindings
  ☆46Updated 9 months ago
• rabix / bunny
  [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0
  ☆75Updated 5 years ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆48Updated last week
• Steven-N-Hart / VariantDB_Challenge
  Finding a scalable alternative to the VCF File for genomics analysis
  ☆14Updated 8 years ago
• LANL-Bioinformatics / EDGE
  EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
  ☆75Updated last month
• opencb / iva
  Generic Interactive Variant Analysis browser
  ☆29Updated 3 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆98Updated 2 years ago
• BioContainers / registry
  Docker for Bioinformatics
  ☆20Updated last year
• nunofonseca / irap
  integrated RNA-seq Analysis Pipeline
  ☆84Updated 6 years ago