R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility
☆15Mar 26, 2026Updated 2 months ago
Alternatives and similar repositories for finalsize
Users that are interested in finalsize are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series☆15Jan 1, 2026Updated 5 months ago
- An R package for simulating line lists☆11May 8, 2026Updated last month
- R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…☆37Jun 3, 2026Updated last week
- Course on nowcasting and forecasting of infectious disease dynamics☆24Jun 1, 2026Updated last week
- Support for the DIDE cluster☆10Nov 22, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An R package to help assess the sensitivity of a Bayesian model (fitted with Stan) to the specification of its likelihood and priors☆11May 29, 2026Updated 2 weeks ago
- Estimate epidemiological delay distributions with brms☆16Apr 13, 2026Updated last month
- R package for easier interactions with the Go.Data API☆13May 15, 2023Updated 3 years ago
- CRAN Task View: Epidemiology☆23Updated this week
- Compute and visualise incidence (reworking of the original incidence package)☆17Mar 25, 2026Updated 2 months ago
- ☆37May 29, 2026Updated 2 weeks ago
- Workshop on hhh4 and the endemic-epidemic framework☆19Oct 13, 2022Updated 3 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 8 months ago
- TEMPLATE for R Markdown lessons☆12Jun 2, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Simulate infectious disease transmission with contact tracing☆17Updated this week
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆21Sep 1, 2025Updated 9 months ago
- ☆11Aug 11, 2020Updated 5 years ago
- Material for a course on (intermediate) Bayesian regression modeling☆21Mar 27, 2025Updated last year
- Short course on parametric survival analysis☆15Apr 13, 2026Updated last month
- Repository to the R package nowcaster, nowcasting with INLA☆24May 12, 2026Updated last month
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆17Oct 31, 2024Updated last year
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆21Sep 12, 2025Updated 9 months ago
- Tools and tutorials for multi-level regression and post-stratification of survey data☆11Mar 5, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Data Wrangling and Automated Reports from 'SIVIGILA' source☆44Feb 4, 2026Updated 4 months ago
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Apr 26, 2022Updated 4 years ago
- 'netmem: Network Measures using Matrices' is an R Package☆12Apr 20, 2026Updated last month
- ☆14Oct 20, 2023Updated 2 years ago
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- Color Palettes Inspired by Works Mexican Muralists☆28Feb 24, 2023Updated 3 years ago
- R scripts for custom brms families☆14Jul 12, 2024Updated last year
- Examples on INLA within MCMC☆12May 15, 2017Updated 9 years ago
- Reproducible Bayesian data analysis pipelines with targets and cmdstanr☆50Sep 29, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Analysing epidemic trends using AutoML approaches.☆20Apr 23, 2021Updated 5 years ago
- Create Contact Matrices from Population Data☆21Feb 24, 2026Updated 3 months ago
- Introduction to simulation of randomized controlled trials in R☆26May 13, 2022Updated 4 years ago
- An R package for tidyverse-friendly causal inference☆10Aug 2, 2019Updated 6 years ago
- rmarkdown-xaringan-slides☆11Jun 2, 2023Updated 3 years ago
- Automatically update SUMMARY.md of a GitBook repo,default Based on the markdown title, not the article name,But if without a title, artic…☆11Jul 6, 2022Updated 3 years ago
- Survival Extrapolation With a Flexible Parametric Model and External Data☆12Mar 10, 2026Updated 3 months ago