Compute and visualise incidence (reworking of the original incidence package)
☆17Mar 25, 2026Updated 2 months ago
Alternatives and similar repositories for incidence2
Users that are interested in incidence2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A cookbook of epidemiological models☆13Mar 1, 2019Updated 7 years ago
- R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility☆15Mar 26, 2026Updated 2 months ago
- Grouped dates in R☆21Mar 25, 2026Updated 2 months ago
- R package for easier interactions with the Go.Data API☆13May 15, 2023Updated 3 years ago
- R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series☆15Jan 1, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Utility functions for the 2019-NCoV outbreak☆27Jul 15, 2020Updated 5 years ago
- Extreme Learning Machine using RcppArmadillo☆15Feb 1, 2026Updated 3 months ago
- R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)☆10Jul 11, 2025Updated 10 months ago
- R Package for individual based epidemiological models☆34Aug 12, 2025Updated 9 months ago
- Applied category theory applied to epidemiological models☆12Aug 7, 2024Updated last year
- A 2-week introduction to R programming course, with a focus on public health datasets☆16Sep 3, 2025Updated 8 months ago
- R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…☆37May 8, 2026Updated 2 weeks ago
- CRAN Task View: Epidemiology☆23Mar 17, 2026Updated 2 months ago
- ☆16Aug 18, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- Helper functions for using mgcv☆12Oct 10, 2019Updated 6 years ago
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆19Dec 22, 2021Updated 4 years ago
- ☆12Jun 18, 2024Updated last year
- Support for the DIDE cluster☆10Nov 22, 2024Updated last year
- Monte-Carlo State Space Models☆19Jul 1, 2024Updated last year
- ARCHIVED☆26May 10, 2022Updated 4 years ago
- Report templates and helper functions for applied epidemiology☆45Feb 25, 2026Updated 3 months ago
- Estimate epidemiological delay distributions with brms☆15Apr 13, 2026Updated last month
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…☆37Feb 2, 2023Updated 3 years ago
- outbreaks: an R package compiling disease outbreak data☆53Dec 8, 2022Updated 3 years ago
- Repository to the R package nowcaster, nowcasting with INLA☆24May 12, 2026Updated 2 weeks ago
- Covid-19 epidemiology - data and analysis☆11Dec 7, 2023Updated 2 years ago
- ECDC in collaboration with Epiconcept developed an R package for monitoring infectious disease surveillance data☆19Jul 24, 2025Updated 10 months ago
- Course on nowcasting and forecasting of infectious disease dynamics☆24May 11, 2026Updated 2 weeks ago
- Tools for generalized quantile modeling☆16Sep 28, 2022Updated 3 years ago
- ☆36Mar 23, 2026Updated 2 months ago
- Survey statistics in a database☆12Aug 27, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- SEIR+ model☆21Jul 25, 2025Updated 10 months ago
- Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"☆11Jul 23, 2022Updated 3 years ago
- Automatic testing of R packages☆54Feb 18, 2026Updated 3 months ago
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆11May 4, 2021Updated 5 years ago
- Fast and lightweight R6 parameter interface☆12Aug 28, 2022Updated 3 years ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Nov 10, 2023Updated 2 years ago
- projects☆31Aug 6, 2021Updated 4 years ago