ukhsa-collaboration / pygomLinks
ODE modelling in Python
☆30Updated 3 months ago
Alternatives and similar repositories for pygom
Users that are interested in pygom are comparing it to the libraries listed below
Sorting:
- Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.☆23Updated last week
- Infectious disease model library and utilities☆15Updated 3 years ago
- A cookbook of epidemiological models☆13Updated 6 years ago
- Documentation for the Stan language and CmdStan☆41Updated this week
- Towards a more flexible BART☆22Updated last week
- A complete environment for Bayesian inference within R☆96Updated last year
- Monitor MCMC runs in the browser☆37Updated last year
- R package for "Epidemics: Models and data using R"☆55Updated 3 years ago
- Extended documentation and model examples for rethinking R package☆33Updated 7 years ago
- Case studies in applied and computational statistics.☆39Updated 6 months ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- A fast C++ API for simulating the spread of epidemics on contact networks.☆41Updated 2 years ago
- ☆32Updated last month
- 'Visualization in Bayesian workflow' by Gabry, Simpson, Vehtari, Betancourt, and Gelman. (JRSS discussion paper and code)☆66Updated 5 years ago
- Repo for code from the SBC paper☆24Updated 6 years ago
- Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.☆16Updated this week
- ☆19Updated this week
- epidemia package☆48Updated 3 years ago
- R package for statistical inference using partially observed Markov processes☆118Updated last month
- ☆56Updated 3 years ago
- Rank-normalization, folding, and localization: An improved R-hat for assessing convergence of MCMC☆32Updated 4 years ago
- Rlgt is an R package for Bayesian Exponential Smoothing☆22Updated 7 months ago
- Code to test Rt estimates against synthetic data☆18Updated 4 years ago
- Text project for theoretical primer on human evolutionary ecology☆35Updated 3 years ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated 2 years ago
- R-package for interpretable nonparametric modeling of longitudinal data using additive Gaussian processes. Contains functionality for in…☆26Updated 3 weeks ago
- ☆18Updated 2 years ago
- Run Stan models in the browser☆51Updated 2 weeks ago
- An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case …☆26Updated 10 months ago
- R package for real-time Rt estimation with penalized splines☆14Updated last week