ukhsa-collaboration / pygomLinks
ODE modelling in Python
☆30Updated 4 months ago
Alternatives and similar repositories for pygom
Users that are interested in pygom are comparing it to the libraries listed below
Sorting:
- Infectious disease model library and utilities☆15Updated 3 years ago
- Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.☆23Updated last week
- Towards a more flexible BART☆23Updated 3 weeks ago
- epidemia package☆48Updated 3 years ago
- Documentation for the Stan language and CmdStan☆41Updated last week
- Case studies in applied and computational statistics.☆39Updated 7 months ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- R package to implement and visualize several epidemiological forecasting methods.☆20Updated last year
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆28Updated 4 years ago
- A cookbook of epidemiological models☆13Updated 6 years ago
- ☆19Updated this week
- ☆12Updated last week
- Monitor MCMC runs in the browser☆37Updated last year
- R package for "Epidemics: Models and data using R"☆55Updated 3 years ago
- Models and infrastructure for forecasting respiratory disease hospitalizations using wastewater data with PyRenew.☆16Updated this week
- Gaussian processes on graphs and lattices in Stan.☆18Updated 8 months ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated 2 years ago
- R package for real-time Rt estimation with penalized splines☆14Updated 2 weeks ago
- Extended documentation and model examples for rethinking R package☆33Updated 8 years ago
- R Package for individual based epidemiological models☆31Updated 3 months ago
- 'Visualization in Bayesian workflow' by Gabry, Simpson, Vehtari, Betancourt, and Gelman. (JRSS discussion paper and code)☆67Updated 5 years ago
- ☆10Updated 3 months ago
- Easily combine predictions from multiple Bayesian models using techniques including (pseudo) Bayesian model averaging, hierarchical stack…☆37Updated last year
- A complete environment for Bayesian inference within R☆96Updated last year
- Text project for theoretical primer on human evolutionary ecology☆35Updated 3 years ago
- Code to test Rt estimates against synthetic data☆18Updated 5 years ago
- Tools for basic signal processing in epidemiology☆12Updated 2 weeks ago
- A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation…☆62Updated last week
- Gallery of Network-Based Epidemic Model Templates for EpiModel☆55Updated last year
- R-package for building and fitting Bayesian ODE models in Stan☆29Updated last year