Data and scripts for epidemiological analysis of the 2026 Bundibugyo Ebola outbreak
☆60Jul 20, 2026Updated this week
Alternatives and similar repositories for BDBV2026-Data
Users that are interested in BDBV2026-Data are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series☆15Jan 1, 2026Updated 6 months ago
- R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…☆39Jul 1, 2026Updated 2 weeks ago
- Course on nowcasting and forecasting of infectious disease dynamics☆24Jul 14, 2026Updated last week
- ☆23Jun 26, 2026Updated 3 weeks ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 9 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆37Jun 10, 2026Updated last month
- Report templates and helper functions for applied epidemiology☆45Feb 25, 2026Updated 4 months ago
- ☆44Apr 13, 2026Updated 3 months ago
- ☆18Mar 30, 2026Updated 3 months ago
- ☆15Jun 18, 2026Updated last month
- A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation…☆66Jul 11, 2026Updated last week
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- Simulate infectious disease transmission with contact tracing☆18Jun 29, 2026Updated 3 weeks ago
- Repository to the R package nowcaster, nowcasting with INLA☆24Jun 23, 2026Updated 3 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Infectious disease model library and utilities☆16Sep 2, 2022Updated 3 years ago
- Additional censored event tools for Distributions.jl☆15Updated this week
- Consensus sequences for U.S. H5N1 clade 2.3.4.4b☆38Updated this week
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆23Dec 9, 2023Updated 2 years ago
- ☆14Oct 20, 2023Updated 2 years ago
- Create Contact Matrices from Population Data☆21Feb 24, 2026Updated 4 months ago
- ☆15Updated this week
- An R package for Bayes Linear emulation and history matching.☆19Dec 1, 2025Updated 7 months ago
- An open-source software package to power microbial genomic databases☆73Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An R package to import, clean, and store case data☆24Dec 9, 2022Updated 3 years ago
- Code for utilising VAE as means of doing exact MCMC inference in complex high-dimensional space☆14Jun 20, 2023Updated 3 years ago
- Phylodynamic inference☆23May 15, 2020Updated 6 years ago
- Source code for the EpiEstim app.☆35Aug 7, 2025Updated 11 months ago
- ☆10Sep 30, 2025Updated 9 months ago
- Notebook for Netmob 2023 Data Challenge☆26Jun 19, 2023Updated 3 years ago
- Scripts to manipulate data☆20Apr 22, 2017Updated 9 years ago
- An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…☆37Feb 2, 2023Updated 3 years ago
- [On-CRAN] Systematically deploy files across multiple GitHub repositories☆18Aug 22, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The Flexible Epidemic Modeling Pipeline☆12Dec 15, 2025Updated 7 months ago
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆21Sep 1, 2025Updated 10 months ago
- ODE modelling in Python☆31Jun 17, 2026Updated last month
- An R package for accessing and summarising the World Health Organisation Tuberculosis data.☆16Jun 11, 2020Updated 6 years ago
- Data associated with the timeline of events during the 2024 H5N1 outbreak in the United States☆27Jul 17, 2024Updated 2 years ago
- Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.☆13Aug 11, 2022Updated 3 years ago
- Applied category theory applied to epidemiological models☆12Aug 7, 2024Updated last year