Report templates and helper functions for applied epidemiology
☆45Feb 25, 2026Updated 8 months ago
Alternatives and similar repositories for sitrep
Users that are interested in sitrep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CRAN Task View: Epidemiology☆24Sep 29, 2026Updated last month
- Small Helpers and Tricks for Epidemics Analysis☆12Sep 20, 2023Updated 3 years ago
- An R package to import, clean, and store case data☆24Dec 9, 2022Updated 3 years ago
- RECON learn: a free, open platform for training material on epidemics analysis☆36Aug 1, 2022Updated 4 years ago
- Convert dates to arbitrary week definitions☆17Oct 6, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- An R package for simulating line lists☆11Sep 7, 2026Updated last month
- Tools for cleaning and matching hierarchically-structured data☆11Jan 30, 2026Updated 9 months ago
- access to geographic locations of african health sites from different sources☆32Jun 9, 2021Updated 5 years ago
- Handling, Visualisation and Analysis of Epidemiological Contacts☆18Apr 17, 2025Updated last year
- Age pyramid construction and plotting☆20Feb 14, 2023Updated 3 years ago
- R Package - Dynamical Systems Approach to Infectious Disease Epidemiology☆26Jul 27, 2026Updated 3 months ago
- Analysing epidemic trends using AutoML approaches.☆20Apr 23, 2021Updated 5 years ago
- ☣ Risk assessment of travel-related disease spread☆19Mar 9, 2026Updated 7 months ago
- Repository for the R for Epidemiology book☆31Dec 31, 2025Updated 9 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Pre-alpha {targets} workshop☆37Updated this week
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆19Dec 22, 2021Updated 4 years ago
- tidytrees: a package for a tidy representation of decision trees.☆12May 20, 2021Updated 5 years ago
- R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series☆15Jan 1, 2026Updated 9 months ago
- Miscellaneous helper tools for epidemiologists☆10Nov 9, 2025Updated 11 months ago
- R Package of methods and data for spatial epidemiology☆34Feb 22, 2023Updated 3 years ago
- An R package to accompany the Epidemiology R Handbook, a free open-access R reference manual for applied epidemiologists and public healt…☆57May 16, 2025Updated last year
- A collection of htmlwidgets handy for epidemiology, etc.☆13Jul 5, 2015Updated 11 years ago
- R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…☆39Sep 28, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Apr 26, 2022Updated 4 years ago
- [work-in-progress] Curated list of HFOSS (Humanitarian Free and Open Source Software) who are very welcome to external developers contrib…☆15Mar 8, 2026Updated 7 months ago
- SEIR+ model☆21Jul 25, 2025Updated last year
- Open Data Kit R API☆11Jan 26, 2026Updated 9 months ago
- Slides for the Intro to RMarkdown workshop☆24Apr 27, 2022Updated 4 years ago
- Source code for the EpiEstim app.☆35Aug 7, 2025Updated last year
- Compute and visualise incidence (reworking of the original incidence package)☆17Mar 25, 2026Updated 7 months ago
- ☣☣ Compute and visualise incidence☆57Jun 19, 2025Updated last year
- Covid-19 epidemiology - data and analysis☆11Dec 7, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Data and scripts for epidemiological analysis of the 2026 Bundibugyo Ebola outbreak☆70Updated this week
- A tool for detection of signals in infectious disease surveillance data.☆18Updated this week
- Data Cleaning workshop for the 2023 R/Medicine Conference☆17Jan 2, 2024Updated 2 years ago
- ☆14Oct 20, 2023Updated 3 years ago
- R functions to upload, share xlsform and also download data from https://kobo.humanitarianresponse.info/ using new KoBo API (KPI) and als…☆13Jul 19, 2019Updated 7 years ago
- Mathematical Modeling of Infectious Disease Dynamics☆284Oct 17, 2026Updated last week
- ☆37Jun 10, 2026Updated 4 months ago