CRAN Task View: Epidemiology
☆23Jun 6, 2026Updated 2 months ago
Alternatives and similar repositories for Epidemiology
Users that are interested in Epidemiology are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Report templates and helper functions for applied epidemiology☆45Feb 25, 2026Updated 5 months ago
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Apr 26, 2022Updated 4 years ago
- Covid-19 epidemiology - data and analysis☆11Dec 7, 2023Updated 2 years ago
- R Package of methods and data for spatial epidemiology☆34Feb 22, 2023Updated 3 years ago
- R Package - Dynamical Systems Approach to Infectious Disease Epidemiology☆26Jul 27, 2026Updated 2 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility☆15Mar 26, 2026Updated 4 months ago
- R package for handling linelist data☆11Jun 6, 2026Updated 2 months ago
- Grouped dates in R☆21Mar 25, 2026Updated 4 months ago
- Repository to the R package nowcaster, nowcasting with INLA☆24Jul 24, 2026Updated 2 weeks ago
- Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"☆11Jul 23, 2022Updated 4 years ago
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Nov 11, 2025Updated 9 months ago
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆21Sep 12, 2025Updated 11 months ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 10 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Infectious disease model library and utilities☆16Sep 2, 2022Updated 3 years ago
- Estimate epidemiological delay distributions with brms☆16Jun 22, 2026Updated last month
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Nov 10, 2023Updated 2 years ago
- An R package to accompany the Epidemiology R Handbook, a free open-access R reference manual for applied epidemiologists and public healt…☆56May 16, 2025Updated last year
- Molecular Epidemiology of Viruses in R☆20Sep 24, 2015Updated 10 years ago
- ☆37Jun 10, 2026Updated 2 months ago
- An R package for Bayes Linear emulation and history matching.☆19Dec 1, 2025Updated 8 months ago
- Simulating virus evolution and epidemiology☆21Feb 22, 2022Updated 4 years ago
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆21Sep 1, 2025Updated 11 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Tools for building predictive models in epidemiology.☆17Jul 20, 2026Updated 3 weeks ago
- An R package to help assess the sensitivity of a Bayesian model (fitted with Stan) to the specification of its likelihood and priors☆11May 29, 2026Updated 2 months ago
- Longitudinal Mediation with Modified Treatment Policies☆12Sep 26, 2025Updated 10 months ago
- Real time estimation of epidemic Effective Reproduction Number for Luxembourg☆12Oct 24, 2022Updated 3 years ago
- An R package for simulating line lists☆11Jul 1, 2026Updated last month
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆19Dec 22, 2021Updated 4 years ago
- R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…☆39Jul 1, 2026Updated last month
- TEMPLATE for R Markdown lessons☆12Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A collection of htmlwidgets handy for epidemiology, etc.☆13Jul 5, 2015Updated 11 years ago
- ☆14May 8, 2025Updated last year
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆11May 4, 2021Updated 5 years ago
- Compute and visualise incidence (reworking of the original incidence package)☆17Mar 25, 2026Updated 4 months ago
- 📊 🌐 🧑🏫 Website for graduate-level course on program evaluation and causal inference using R, built with Quarto☆65Nov 14, 2022Updated 3 years ago
- [On-CRAN] Systematically deploy files across multiple GitHub repositories☆18Aug 22, 2025Updated 11 months ago
- R package for estimating excess deaths from daily count data☆20Dec 3, 2025Updated 8 months ago