Tools for building predictive models in epidemiology.
☆18Aug 22, 2026Updated last week
Alternatives and similar repositories for epipredict
Users that are interested in epipredict are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Course on nowcasting and forecasting of infectious disease dynamics☆25Aug 17, 2026Updated last week
- ☆17Mar 30, 2026Updated 5 months ago
- R package for real-time Rt estimation with penalized splines☆16Jan 12, 2026Updated 7 months ago
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Nov 11, 2025Updated 9 months ago
- This repository contains python implementations of scoring rules for forecasts provided in a prediction interval format.☆11Jul 31, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Models and infrastructure for routine forecasting of respiratory disease burden☆16Updated this week
- Estimate epidemiological delay distributions with brms☆16Updated this week
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆17Oct 31, 2024Updated last year
- Tools for basic signal processing in epidemiology☆12Aug 20, 2026Updated last week
- ☆13Updated this week
- Source and slides for "Why you should be using tidymodels" at UW-Madison☆17Nov 20, 2023Updated 2 years ago
- Nowcasting by Bayesian Smoothing☆19Jun 3, 2026Updated 2 months ago
- An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case …☆32Jul 26, 2026Updated last month
- Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.☆29Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Utilities for Scoring and Assessing Predictions☆64Updated this week
- Steve's {ggplot2} themes and related theme elements☆12Apr 27, 2023Updated 3 years ago
- 🪐 Generate "solar system" plots with {ggplot2}☆23Apr 26, 2023Updated 3 years ago
- Tools for constructing and plotting Markov Random Fields in R for graphical data☆24Aug 13, 2026Updated 2 weeks ago
- US RSV Forecast Hub☆12Jun 5, 2026Updated 2 months ago
- Utility provides a more meaningful measure of forecast skill than goodness-of-fit☆18Apr 26, 2022Updated 4 years ago
- An R package to help assess the sensitivity of a Bayesian model (fitted with Stan) to the specification of its likelihood and priors☆11May 29, 2026Updated 3 months ago
- Process very large Stan models efficiently☆14Dec 5, 2025Updated 8 months ago
- Data and forecast submission repository for the 2023 CDC West Nile virus Forecasting Challenge☆11Oct 30, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆10Jul 21, 2024Updated 2 years ago
- An R package for the analysis of infectious disease transmission data☆10Nov 8, 2021Updated 4 years ago
- ☆13Jul 20, 2026Updated last month
- Variant forecasting demo☆11Jul 20, 2026Updated last month
- CRAN Task View: Epidemiology☆23Jun 6, 2026Updated 2 months ago
- Track machine learning experiments☆19Aug 2, 2023Updated 3 years ago
- Code and data for the manuscript "Optimal, near-optimal, and robust epidemic control"☆11Jul 23, 2022Updated 4 years ago
- ☆37Jun 10, 2026Updated 2 months ago
- Tool-set to support Bayesian evidence synthesis in R☆26Aug 4, 2026Updated 3 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Bayesian Modelling in Epidemiology Case Line Lists☆14Oct 7, 2025Updated 10 months ago
- Style data.table according to the opinions of TheDataCollective☆15Feb 1, 2023Updated 3 years ago
- Gaussian processes on graphs and lattices in Stan.☆19Mar 17, 2025Updated last year
- An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.☆27Updated this week
- Common fields for (meteorological/weather) forecast data.☆15Jan 9, 2025Updated last year
- Joint modeling multivariate longitudinal and time-to-event outcomes with INLA☆23Jul 27, 2026Updated last month
- Reference OSSL calibration models fitting steps and tutorials☆18Feb 10, 2025Updated last year