elaspic / elaspic2Links
Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objective function.
☆23Updated 4 years ago
Alternatives and similar repositories for elaspic2
Users that are interested in elaspic2 are comparing it to the libraries listed below
Sorting:
- PyDock Tutorial☆34Updated 7 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- ☆53Updated 2 months ago
- RosettaDesign using PyRosetta☆33Updated 6 years ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 5 months ago
- Set of useful HADDOCK utility scripts☆55Updated last month
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆74Updated 3 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆42Updated 5 months ago
- ☆74Updated last year
- Analysis of alphafold and colabfold results☆32Updated last month
- Active Learning-Assisted Directed Evolution for Protein Engineering☆70Updated 2 weeks ago
- scripts and facilities for in-silico mutagenesis with FoldX☆61Updated 3 months ago
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆45Updated last year
- Machine learning prediction of enzyme optimum pH☆47Updated 6 months ago
- ☆47Updated 10 months ago
- Transformer Based Language Model for Peptide Property Prediction☆48Updated last year
- ☆43Updated 2 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆65Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 4 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- Direct coupling analysis software for protein and RNA sequences☆53Updated 3 months ago
- ☆87Updated last year
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆114Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆108Updated last month
- GTalign, high-performance protein structure alignment, superposition and search☆51Updated 2 months ago
- Official repository for the ProteinDJ protein design pipeline☆66Updated last week
- Predicting high-fitness mutations based on protein inverse folding models☆66Updated last month
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆24Updated 5 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago