ckbjimmy / clnegLinks
Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification
☆21Updated 5 years ago
Alternatives and similar repositories for clneg
Users that are interested in clneg are comparing it to the libraries listed below
Sorting:
- Medical Similarity Dataset creation from SNOMED☆28Updated 3 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆34Updated 5 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆49Updated 3 years ago
- ☆38Updated 3 years ago
- ☆101Updated 3 years ago
- MedNLI - A Natural Language Inference Dataset For The Clinical Domain☆131Updated 2 years ago
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- ☆23Updated 2 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆32Updated last year
- A fine-tuned BERT using EHR notes.☆14Updated 6 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆66Updated 4 years ago
- ☆55Updated 5 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Clinical Concept Extraction with Contextual Word Embedding☆40Updated 5 years ago
- ☆221Updated 11 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated 3 months ago
- ☆98Updated 2 years ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆154Updated 2 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- Negation detection NLP tool. If you use the code, please cite George Gkotsis, Sumithra Velupillai, Anika Oellrich, Harry Dean,…☆54Updated 8 years ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- Machine reading comprehension on clinical case reports☆150Updated 3 months ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆91Updated 3 years ago
- This repository contains machine learning related work for the corpus to graph project, including Jupyter research notebooks and a Flask …☆46Updated 9 years ago
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆50Updated 4 years ago
- Automatically exported from code.google.com/p/negex☆36Updated 3 years ago
- A simple baseline for the MedNLI dataset☆21Updated 6 years ago
- This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…☆37Updated 6 months ago
- Flexible and powerful platform for biomedical information extraction from text☆39Updated 8 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 5 years ago