medspacy / sectionizer
A rule-based Python module for spitting documents into sections.
☆12Updated 4 years ago
Alternatives and similar repositories for sectionizer:
Users that are interested in sectionizer are comparing it to the libraries listed below
- ☆53Updated 4 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 4 years ago
- ☆22Updated 2 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- An information extraction system for free-text eligibility criteria☆37Updated 6 years ago
- Classes for ClinicalTrials.gov related projects☆47Updated 5 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆30Updated 10 months ago
- Python wrapper for UMLS REST API☆10Updated 6 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- ☆98Updated 3 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 4 years ago
- UMLS Graph database for semantic queries☆20Updated 2 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆79Updated last week
- A convolutional neural network model for relation extraction.☆13Updated 2 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- init☆12Updated 3 months ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- New approach to use Snomed-CT Concept using Word Embedding with Word2vec☆20Updated 6 years ago
- Weakly supervised medical named entity classification☆72Updated 2 years ago
- Miscellaneous tools for clinical ML☆29Updated 7 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 5 months ago
- a Python tool to extract and structure numeric lab test comparison statements from text☆22Updated last year
- ☆38Updated 3 years ago
- Negation detection NLP tool. If you use the code, please cite George Gkotsis, Sumithra Velupillai, Anika Oellrich, Harry Dean,…☆55Updated 8 years ago
- Semantic query and text mining tool☆22Updated last year
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆29Updated 7 years ago
- ☆18Updated 11 months ago
- a library for named entity recognition developed by UF HOBI NLP lab featuring SOTA algorithms☆146Updated last year