dirkweissenborn / ctakes-serverLinks
A simple REST-server around ctakes clinical pipeline.
☆30Updated 8 years ago
Alternatives and similar repositories for ctakes-server
Users that are interested in ctakes-server are comparing it to the libraries listed below
Sorting:
- Health NLP Examples☆89Updated 6 years ago
- Basic Python 3 tools to interact with UMLS lexica☆123Updated 6 years ago
- ☆98Updated 2 years ago
- A JSON-based rest service to process unstructured clinical text through a smart natural language processing system.☆51Updated 2 years ago
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Updated 2 years ago
- Classes for ClinicalTrials.gov related projects☆47Updated 5 years ago
- Clinical Pipeline Engine using Apache cTAKES☆24Updated 9 years ago
- Clinical Named Entity Recognition system (CliNER) is an open-source natural language processing system for named entity recognition in cl…☆234Updated 4 years ago
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆107Updated last year
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…☆85Updated 10 months ago
- Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning☆43Updated 2 years ago
- ☆23Updated 5 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Python wraper for MetaMap☆174Updated 4 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆81Updated this week
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- ☆16Updated 4 years ago
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆173Updated 2 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆156Updated 2 years ago
- Reach Biomedical Information Extraction☆97Updated 7 months ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 3 years ago
- MedXN is a medication normalization system built upon Apache UIMA framework.☆24Updated last year
- A near real-time named-entity recognizer☆61Updated this week
- Hadoop integration code for working with with Apache cTAKES☆10Updated 11 years ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆329Updated 3 years ago
- EpiTator annotates epidemiological information in text documents. It is the natural language processing framework that powers GRITS and E…☆41Updated 3 years ago
- Apache UIMA uimaFIT☆32Updated 7 months ago
- Utility for cui2vec in Go☆12Updated 2 years ago
- Repository for managing python tools that model standoff annotations for i2b2 2014 challenge☆14Updated 10 years ago