cellimnet / microsnoop-publishLinks
Microsnoop: A generalist tool for microscopy image representation
☆11Updated 10 months ago
Alternatives and similar repositories for microsnoop-publish
Users that are interested in microsnoop-publish are comparing it to the libraries listed below
Sorting:
- ☆36Updated 2 years ago
- Development of PICASSO plugin for napari☆16Updated 3 years ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆83Updated 2 months ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆87Updated last week
- Microsopic Image Analyzer (MIA)☆28Updated 5 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated last month
- Accurate and efficient spot detection for microscopy data☆115Updated 2 weeks ago
- QuPath extension for Cellsparse☆19Updated 8 months ago
- Generate consensus 3D cells segmentations by combining 2D cell segmentations from any combination of xy, xz, yz views, compatible with ou…☆53Updated last month
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- ☆91Updated 2 months ago
- Automated mitochondrial segmentation and tracking.☆33Updated 4 years ago
- StarDist plugin for napari☆38Updated last year
- The official QuPath extension for InstanSeg☆29Updated 3 months ago
- Scientific Dataset Quality Control and Data Exploration Tool☆20Updated this week
- SplineDist: Automated Cell Segmentation with Spline Curves☆70Updated last year
- ☆36Updated last year
- Lab for quantitative bioimage analysis experiments in Python☆19Updated last month
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆66Updated last month
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 3 months ago
- ☆21Updated last year
- Image registration (alignment) software for large microscopy images☆27Updated 2 years ago
- An introduction to bioimage analysis - http://bioimagebook.github.io☆76Updated 5 months ago
- A napari plugin for clustering objects according to their properties.☆89Updated last week
- open source version of VAMPIRE analysis : visually-aided morpho-phenotyping recognition☆31Updated 3 years ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆162Updated 5 months ago
- Piecewise alignment for layers of mosaics☆33Updated 4 months ago
- Deconvolution of widefield microscopy images and generation of point spread functions☆58Updated last week
- Find profile pairs and compute retrieval metrics between them.☆21Updated last week
- ☆51Updated 8 months ago