cellimnet / microsnoop-publishLinks
Microsnoop: A generalist tool for microscopy image representation
☆10Updated 6 months ago
Alternatives and similar repositories for microsnoop-publish
Users that are interested in microsnoop-publish are comparing it to the libraries listed below
Sorting:
- Development of PICASSO plugin for napari☆17Updated 2 years ago
- ☆34Updated last year
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆77Updated 5 months ago
- Find profile pairs and compute metrics between them.☆19Updated last week
- ☆20Updated last year
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 months ago
- Microsopic Image Analyzer (MIA)☆28Updated 2 weeks ago
- Framework for image and flow cytometry analysis☆28Updated last month
- CellProfiler tutorial pipelines and images☆93Updated 3 weeks ago
- Image registration (alignment) software for large microscopy images☆25Updated last year
- Piecewise alignment for layers of mosaics☆29Updated this week
- ☆87Updated 5 months ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 11 months ago
- Raw format to OME-TIFF converter☆55Updated 3 weeks ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆55Updated 10 months ago
- Automated mitochondrial segmentation and tracking.☆33Updated 4 years ago
- QuPath extension for Cellsparse☆19Updated 3 months ago
- Interactive visualization of spatial omics data☆64Updated this week
- computer vision models for single-cell phenotyping☆67Updated this week
- Accurate and efficient spot detection for microscopy data☆95Updated 3 weeks ago
- StarDist plugin for napari☆39Updated last year
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 3 weeks ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆80Updated this week
- An introduction to bioimage analysis - http://bioimagebook.github.io☆72Updated 3 weeks ago
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆151Updated 3 weeks ago
- ☆32Updated last month
- collection of mass spectrometry imaging workflows☆13Updated 3 months ago
- Your Personal Assistant in Computational Bioimaging.☆44Updated 5 months ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆82Updated 2 weeks ago
- Whole slide image registration through wsireg in napari.☆13Updated 2 years ago