cellimnet / microsnoop-publishLinks
Microsnoop: A generalist tool for microscopy image representation
☆11Updated 9 months ago
Alternatives and similar repositories for microsnoop-publish
Users that are interested in microsnoop-publish are comparing it to the libraries listed below
Sorting:
- Development of PICASSO plugin for napari☆16Updated 2 years ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆86Updated this week
- Accurate and efficient spot detection for microscopy data☆111Updated last week
- ☆35Updated last year
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆82Updated 2 weeks ago
- Automated mitochondrial segmentation and tracking.☆33Updated 4 years ago
- Guides and code for 3D nuclear instance segmentation☆22Updated last week
- Scientific Dataset Quality Control and Data Exploration Tool☆19Updated this week
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆88Updated last week
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 3 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 2 months ago
- Microsopic Image Analyzer (MIA)☆28Updated 3 months ago
- Find profile pairs and compute retrieval metrics between them.☆21Updated this week
- Course and exercises on deep learning for microscopy image analysis☆21Updated 2 weeks ago
- QuPath extension for Cellsparse☆19Updated 7 months ago
- Piecewise alignment for layers of mosaics☆29Updated 3 months ago
- ☆20Updated last year
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- ☆28Updated last year
- CellProfiler tutorial pipelines and images☆98Updated last month
- An introduction to bioimage analysis - http://bioimagebook.github.io☆74Updated 3 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated last week
- Image registration (alignment) software for large microscopy images☆26Updated 2 years ago
- StarDist plugin for napari☆38Updated last year
- Lab for quantitative bioimage analysis experiments in Python☆18Updated this week
- A napari plugin for clustering objects according to their properties.☆87Updated last week
- ☆91Updated last month
- SplineDist: Automated Cell Segmentation with Spline Curves☆69Updated last year
- ☆51Updated 7 months ago