Alternatives and similar repositories for RCy3

Users that are interested in RCy3 are comparing it to the libraries listed below

• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated 2 months ago
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆59Updated last week
• Bioconductor / BiocParallel
  Bioconductor facilities for parallel evaluation
  ☆68Updated 3 weeks ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆72Updated 2 months ago
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆78Updated 2 months ago
• rnabioco / valr
  Genome Interval Arithmetic in R
  ☆93Updated 2 weeks ago
• tgirke / systemPipeR
  Project Website:
  ☆54Updated 3 weeks ago
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆79Updated last week
• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆76Updated 6 years ago
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆20Updated 3 weeks ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• bigomics / omicsplayground
  Visual self-service analytics platform for big omics data.
  ☆125Updated this week
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated 3 months ago
• CRI-iAtlas / shiny-iatlas
  An interactive web portal for exploring immuno-oncology data. This repo now superseded by iatlas-app
  ☆49Updated 4 years ago
• XiaoLuo-boy / ggheatmap
  ggplot2 version of heatmap
  ☆90Updated 2 years ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆53Updated 3 months ago
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆64Updated 3 weeks ago
• jorainer / ensembldb
  This is the ensembldb development repository.
  ☆35Updated 10 months ago
• jminnier / STARTapp
  The START App: R Shiny Transcriptome Analysis Resource Tool
  ☆90Updated 4 years ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• Bioconductor / SummarizedExperiment
  A container (S4 class) for matrix-like assays
  ☆36Updated 3 weeks ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆46Updated 3 weeks ago
• DillonHammill / CytoExploreR
  Interactive Cytometry Data Analysis
  ☆67Updated 2 weeks ago
• pcastellanoescuder / POMA
  Omics Data Analysis Tools
  ☆12Updated 7 months ago
• Bohdan-Khomtchouk / shinyheatmap
  Web application for enormous biological heatmaps
  ☆66Updated 4 years ago
• waldronlab / TCGAutils
  Toolbox package for organizing and working with TCGA data
  ☆28Updated last week
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆73Updated last year
• svalvaro / drawCell
  R package to create cell pictures.
  ☆134Updated 2 years ago
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆113Updated last year
• datacarpentry / genomics-r-intro
  Intro to R and RStudio for Genomics
  ☆30Updated last week