Cytoscape interface to STRING and STITCH
☆11May 9, 2025Updated last year
Alternatives and similar repositories for stringApp
Users that are interested in stringApp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cytoscape app that clusters a given network based on topology to find densely connected regions☆11Sep 8, 2026Updated last month
- This repository is used for the HeaDS git and GitHub workshop 2023☆18Apr 22, 2026Updated 5 months ago
- Contains standard practices/resources/style guides for data science and development at DIHI☆10Jun 8, 2023Updated 3 years ago
- GitHub pages for GPML-Repo☆12Updated this week
- An R package for working with phenotypic screening data☆10Nov 22, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- customizable robust Independent Component Analysis (ICA)☆12Sep 16, 2024Updated 2 years ago
- GPRuler, an open-source computational framework to automate the reconstruction process of Gene-Protein-Reaction (GPR) rules within metabo…☆13Oct 11, 2022Updated 3 years ago
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Sep 3, 2021Updated 5 years ago
- New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community☆60Dec 3, 2025Updated 10 months ago
- FLYCOP (FLexible sYnthetic Consortium OPtimization)☆12Sep 24, 2018Updated 8 years ago
- DEAPP shiny App☆30Jun 8, 2022Updated 4 years ago
- annotating microbial co-occurrence networks☆12Oct 7, 2025Updated last year
- CREST - Classification Resources for Environmnetal Sequence Tags, is a collection of software and databases for taxonomic classification …☆12Mar 20, 2022Updated 4 years ago
- Codes to regenerate figures for mutagen paper☆12Apr 8, 2021Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Network visualization webapp.☆14Mar 6, 2023Updated 3 years ago
- ☆11Dec 15, 2023Updated 2 years ago
- Microbial community-scale metabolic modeling predicts personalized short-chain-fatty-acid production profiles in the human gut☆10Jun 25, 2024Updated 2 years ago
- MGnify RESTful API☆10Apr 10, 2026Updated 5 months ago
- EnDED is a program that aims to detect environmentally-driven ("indirect") edges in an association network.☆10Dec 1, 2023Updated 2 years ago
- Dynamic FBA for use with COBRApy metabolic models☆10Sep 26, 2023Updated 3 years ago
- Inference of gene dependency from RNAi screening datasets.☆19Apr 9, 2020Updated 6 years ago
- TRAPI service for BioThings Explorer☆15Mar 31, 2026Updated 6 months ago
- Axel tries to accelerate HTTP/FTP downloading process by using multiple connections for one file. It can use multiple mirrors for a downl…☆23Sep 26, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆11Aug 26, 2022Updated 4 years ago
- [Archived] SnakeMake pipeline to run BlobTools on public assemblies☆11Jul 3, 2023Updated 3 years ago
- A set of programs for the taxonomic analysis of genetic sequences☆15Jun 12, 2023Updated 3 years ago
- Analyses for Manuscript "Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes"☆13Aug 4, 2020Updated 6 years ago
- Microbial Phenotype Prediction, successor to PICA, implemented with Python 3.7 and scikit-learn☆13Sep 10, 2021Updated 5 years ago
- Statistical design and analysis of experiments with R☆22Jan 6, 2022Updated 4 years ago
- Python package simulating artificial selection on microbial communities☆15Aug 15, 2023Updated 3 years ago
- MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded …☆10May 12, 2026Updated 4 months ago
- Interactive tool for Phosphoproteomics☆14May 6, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Alignment-free Phylogenetic Placement using filtered SPAced word Matches☆13Jul 19, 2023Updated 3 years ago
- Javascript alignment viewer☆12Nov 29, 2023Updated 2 years ago
- Teaching materials for SymbNET course: from MAGs to GEMs☆15Jan 8, 2024Updated 2 years ago
- Update RCytoscape to work for Cytoscape 3.0 and higher using CyREST☆16Feb 3, 2018Updated 8 years ago
- COnstraint Based Reconstruction and EXascale Analysis (in Julia)☆19Sep 26, 2025Updated last year
- ☆14Sep 30, 2020Updated 6 years ago
- Cytoscape App Store web application code☆20Sep 23, 2026Updated 2 weeks ago