Alternatives and similar repositories for 3Dmodel_scripts:

Users that are interested in 3Dmodel_scripts are comparing it to the libraries listed below

• Edinburgh-Genome-Foundry / BandWagon
  🎺 Plot DNA digestion band patterns with Python
  ☆19Updated 2 years ago
• Edinburgh-Genome-Foundry / genome_collector
  Easily download genomes and build BLAST/Bowtie indexes in Python
  ☆21Updated 2 years ago
• benchling / integration-examples
  Example usage of the Benchling API: https://docs.benchling.com/
  ☆31Updated 11 months ago
• Edinburgh-Genome-Foundry / DnaWeaver
  A route planner for DNA assembly
  ☆31Updated last year
• Edinburgh-Genome-Foundry / GoldenHinges
  Short overhangs design for DNA assembly
  ☆12Updated 2 years ago
• Edinburgh-Genome-Foundry / genedom
  Batch domestication of genetic parts with Python
  ☆15Updated 2 years ago
• Edinburgh-Genome-Foundry / DnaCauldron
  Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
  ☆54Updated last year
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆68Updated last week
• HumanCellAtlas / metadata-schema
  This repo is for the metadata schemas associated with the HCA
  ☆65Updated this week
• Edinburgh-Genome-Foundry / kappagate
  Predict DNA assembly clone validity rates - powered by Kappa
  ☆9Updated 4 years ago
• Edinburgh-Genome-Foundry / Caravagene
  🎨 Python library to plot multi-part genetic constructs
  ☆25Updated last year
• colomoto / colomoto-docker
  The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks
  ☆25Updated 2 weeks ago
• geneontology / go-annotation
  This repository hosts the tracker for issues pertaining to GO annotations.
  ☆38Updated this week
• SynBioDex / pySBOL2
  A pure Python implementation of the SBOL standard.
  ☆21Updated this week
• Edinburgh-Genome-Foundry / CUBA
  🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software
  ☆20Updated 2 years ago
• ncbi / magicblast
  ☆35Updated last year
• Pappulab / localCIDER
  localCIDER - sequence analysis tool for disordered protein sequences
  ☆23Updated last year
• Edinburgh-Genome-Foundry / BandWitch
  💫 Computer-aided DNA assembly validation and identification from restriction digests.
  ☆15Updated 2 years ago
• esacinc / PDC-Public
  The public repository for the Proteomic Data Commons UI and APIs
  ☆13Updated 8 months ago
• ncbi / osiris
  OSIRIS is a public domain quality assurance software package that facilitates the assessment of multiplex short tandem repeat (STR) DNA p…
  ☆26Updated 10 months ago
• ginkgobioworks / edge
  Efficiently keep track of changes to genomes
  ☆38Updated 6 months ago
• reactome / reactome2py
  python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
  ☆28Updated last year
• benchling / clustalo-python
  A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)
  ☆21Updated 3 years ago
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆40Updated 2 years ago
• geneontology / go-announcements
  Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.
  ☆14Updated 2 years ago
• refresh-bio / FAMSA
  Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
  ☆153Updated 5 months ago
• Edinburgh-Genome-Foundry / SBOL-Visual-CSS
  Draw genetic elements with HTML & CSS
  ☆16Updated 8 years ago
• normandavey / ProcessedAlphafold
  ☆31Updated 3 years ago
• rcsb / rcsb-saguaro-3d
  ☆28Updated 3 weeks ago
• sshen8 / peglit
  Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif
  ☆8Updated last year