Python and UNIX CLI utilities to simplify interaction with the NIH/NCI Genomics Data Commons
☆31Oct 11, 2018Updated 7 years ago
Alternatives and similar repositories for gdctools
Users that are interested in gdctools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python API for Genomic Data Commons☆20Sep 27, 2016Updated 9 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- Provide R access to the NCI Genomic Data Commons portal.☆90Updated this week
- GDC Data Transfer Tool☆157Jun 10, 2025Updated 10 months ago
- Data dictionary for the GDC☆55Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆36Jul 10, 2024Updated last year
- Emacs minor mode for editing Homebrew formulae☆15Sep 7, 2022Updated 3 years ago
- The BioPerl Web site: http://bioperl.org☆14Aug 29, 2019Updated 6 years ago
- Perlbrew minimal emacs util☆15Jan 3, 2015Updated 11 years ago
- node security project npm utilities☆11Sep 15, 2017Updated 8 years ago
- Javascript library for visualizing OncoGrids and related tracks☆26Aug 14, 2020Updated 5 years ago
- TCGAbiolinksGUI code development for R/Bioconductor submission http://tcgabiolinks.fmrp.usp.br:3838/☆37Aug 2, 2021Updated 4 years ago
- ☆10Feb 21, 2017Updated 9 years ago
- ☆12Mar 19, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fast Neighbor-Joining and other distance-based methods for phylogenetics☆15Jun 21, 2024Updated last year
- ☆12Apr 28, 2016Updated 10 years ago
- Web version of GenomeRunner☆11Nov 6, 2016Updated 9 years ago
- multi-resolution clustering of omics data☆14Apr 9, 2025Updated last year
- Mongoose.js driver for Cycle.js.☆11Sep 28, 2016Updated 9 years ago
- ☆10Mar 26, 2026Updated last month
- jQuery Foundation License Verification☆13Mar 16, 2021Updated 5 years ago
- Open Targets Genetics UI☆15Jan 31, 2025Updated last year
- myVCF: a web-based platform for target and exome mutations data management☆21Apr 13, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- manage a repository of 0install feeds☆18Apr 6, 2026Updated last month
- A client for the Ensembl REST API written in the Python programming language☆29Dec 8, 2025Updated 4 months ago
- Drivers integration/conformance tests☆13Apr 29, 2026Updated last week
- Documentation on extending Cloud Foundry☆13Apr 23, 2026Updated last week
- R package to detect splicing QTLs (sQTLs)☆15Feb 28, 2021Updated 5 years ago
- Tool to download/merge RNASeq data from the GDC Portal in matrices identified by TCGA barcode☆36May 18, 2020Updated 5 years ago
- ☆11May 11, 2023Updated 2 years ago
- ☆11Jun 23, 2017Updated 8 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Oct 6, 2025Updated 7 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆42Mar 26, 2026Updated last month
- Official repository for GDC User Guides in Markdown format☆68Aug 15, 2024Updated last year
- mock the npm registry☆27Dec 10, 2022Updated 3 years ago
- simulate sequence data and complicated pedigree structures☆16Apr 5, 2023Updated 3 years ago
- Scripts, templates, and configuration for the CF Infrastructure team's CI pipelines☆13Mar 30, 2017Updated 9 years ago
- Bayesian analysis of MPRA and other high-throughput genomic assays☆10Jul 27, 2020Updated 5 years ago
- ☆17Jul 3, 2019Updated 6 years ago