brandonyph / LiquidBrain_ScriptsLinks
This folder ultimately should contains all my project shown in my Youtube channel.
☆41Updated 3 years ago
Alternatives and similar repositories for LiquidBrain_Scripts
Users that are interested in LiquidBrain_Scripts are comparing it to the libraries listed below
Sorting:
- SIB course on single cell transcriptomics by mostly using the Seurat pipeline☆85Updated 5 months ago
- A complete guide for analyzing bulk RNA-seq data. Go from raw FASTQ files to mapping reads using STAR and differential gene expression an…☆117Updated 5 years ago
- ☆43Updated 4 years ago
- Batch effect adjustment based on negative binomial regression for RNA sequencing count data☆201Updated 5 years ago
- My youtube programming scripts☆59Updated last year
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆52Updated 6 years ago
- A step-by-step tutorial for Weighted correlation network analysis (WGCNA)☆72Updated 3 years ago
- ☆102Updated 3 months ago
- Analysis pipeline for ATAC-seq data☆83Updated 2 years ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆29Updated last year
- Cell types enrichment analysis☆206Updated last year
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆98Updated 2 years ago
- my notes for scATACseq analysis☆133Updated last year
- Convert Seurat objects to 10x Genomics Loupe files.☆147Updated 6 months ago
- Introduction to bulk RNA-seq☆134Updated 8 months ago
- Integrative pathway enrichment analysis of multivariate omics data☆118Updated 6 months ago
- Basic workflow for ATAC-seq analysis☆92Updated last year
- The package wrapping the book, for deployment via the Bioconductor build system.☆98Updated last year
- Updated implementation of the GSEA-P R application for modern R distributions☆99Updated 4 years ago
- A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis☆111Updated 2 years ago
- ☆199Updated last month
- published papers with a lot of data☆74Updated 9 months ago
- A continually expanding collection of cancer genomics notes and data☆112Updated this week
- Step-by-step analysis pipeline for RNA-seq data☆161Updated 2 years ago
- Differential RhythmicitY analysis in R is an R package that provides the statistical framework to assess differential rhythmicity of a ti…☆19Updated 6 months ago
- ☆145Updated 7 years ago
- Single Cell Analysis Pipelines☆114Updated last week
- Differential gene expression analysis on RNA-seq data☆13Updated last year
- The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/☆101Updated 3 years ago
- Single cell RNA sequencing analysis course☆233Updated last week