blab / sars-like-covLinks
This is a one-off Nextstrain build for SARS-like coronaviruses
☆82Updated 4 years ago
Alternatives and similar repositories for sars-like-cov
Users that are interested in sars-like-cov are comparing it to the libraries listed below
Sorting:
- Fishers Exact Test for Python (Cython)☆66Updated 10 months ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆77Updated last month
- Efficient handling of FASTQ files from Python☆51Updated 2 months ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆86Updated 8 years ago
- 3D Genome Browser☆32Updated 4 years ago
- Machine-curated database of genetic disease and genome-wide association studies☆57Updated 6 years ago
- Software, architecture, and data index design for the 2018/2019 Virus Discovery Project☆30Updated 5 years ago
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆17Updated 5 years ago
- ☆54Updated last week
- High-Performance NoSQL database and RESTful web services to access to most relevant biological data. Found a bug or have an idea for a ne…☆92Updated last week
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆21Updated 2 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 6 years ago
- Align sequences and then parse features.☆17Updated 3 months ago
- DNAscan is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring ve…☆43Updated 3 years ago
- Refine.bio harmonizes petabytes of publicly available biological data into ready-to-use datasets for cancer researchers and AI/ML scienti…☆133Updated last year
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆27Updated 6 years ago
- PiGx SARS-CoV-2 wastewater sequencing pipeline☆18Updated 2 years ago
- RethinkDB database to support real-time virus analysis☆35Updated last week
- KnetMiner - webapp to search and visualize genome-scale knowledge graphs☆29Updated 4 months ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQ☆11Updated 8 years ago
- A cookiecutter template for Snakemake workflows☆60Updated 4 years ago
- Python-based framework for computational immunomics☆40Updated 4 years ago
- Tools for munging genomic data☆21Updated 6 years ago
- ☆25Updated 4 years ago
- Tools and utilities for running Dockerized metagenomics tools in the Cloud☆22Updated 6 years ago
- Phylogenetic tree library for JavaScript/Node.js☆37Updated 3 years ago
- BioThings API framework - Making high-performance API for biological annotation data☆49Updated this week
- Understanding sequence conservation with deep learning☆20Updated 8 years ago
- Scripts for miscelleneous bioinformatics tasks☆49Updated 5 years ago
- Store of the trained model for pangolin to access.☆55Updated 3 years ago