Alternatives and similar repositories for sars-like-cov:

Users that are interested in sars-like-cov are comparing it to the libraries listed below

• widdowquinn / 2018-03-06-ibioic
  Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.
  ☆20Updated 6 years ago
• trvrb / dynamics-practical
  Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data
  ☆32Updated 11 years ago
• omarwagih / rmotifx
  Discovery of biological sequence motifs in R
  ☆27Updated 6 years ago
• brentp / fishers_exact_test
  Fishers Exact Test for Python (Cython)
  ☆64Updated 4 months ago
• 3DGenomes / TADkit
  3D Genome Browser
  ☆31Updated 3 years ago
• davek44 / utility
  Computational biology utility scripts
  ☆19Updated 7 months ago
• Edinburgh-Genome-Foundry / genome_collector
  Easily download genomes and build BLAST/Bowtie indexes in Python
  ☆21Updated 2 years ago
• biocore / calour
  exploratory and interactive microbiome analyses based on heatmaps
  ☆27Updated this week
• BIMSBbioinfo / pigx_sars-cov-2
  PiGx SARS-CoV-2 wastewater sequencing pipeline
  ☆18Updated last year
• jbloomlab / alignparse
  Align sequences and then parse features.
  ☆17Updated 5 months ago
• statbiophys / SONIA
  Infer selection pressures on features of amino acid CDR3 sequences.
  ☆23Updated 9 months ago
• gitools / gitools
  Gitools, is a framework for analysis and visualization of genomic data. Data and results are represented as browsable heatmaps. Gitools a…
  ☆28Updated 2 years ago
• benchling / clustalo-python
  A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)
  ☆21Updated 3 years ago
• ncbi / magicblast
  ☆35Updated last year
• amarallab / NullSeq
  Creates Random Coding Sequences with specified GC content and Amino Acid usage
  ☆9Updated 2 years ago
• QData / FastSK
  Bioinformatics 2020: FastSK: Fast and Accurate Sequence Classification by making gkm-svm faster and scalable. https://fastsk.readthedocs.…
  ☆21Updated 2 years ago
• babelomics / babelomics
  ☆41Updated 6 years ago
• jbloomlab / dms_tools2
  software for the analysis and visualization of deep mutational scanning data
  ☆34Updated 2 years ago
• daler / metaseq
  Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data
  ☆87Updated 4 years ago
• blab / ncov-phylodynamics
  Phylodynamic estimation of nCoV incidence and prevalence
  ☆19Updated 4 years ago
• neilfws / utils4bioinformatics
  Little code snippets that do (hopefully) useful things
  ☆23Updated last year
• JanZrimec / DeepExpression
  ☆33Updated 2 years ago
• broadinstitute / adapt
  A package for designing activity-informed nucleic acid diagnostics for viruses.
  ☆30Updated last year
• nextstrain / fauna
  RethinkDB database to support real-time virus analysis
  ☆33Updated this week
• roblanf / sarscov2phylo
  Global phylogenies of SARS-CoV-2 sequences
  ☆86Updated last year
• whitehead / plaac
  Prion-Like Amino Acid Composition
  ☆16Updated last year
• clauswilke / proteinER
  Supporting code for the paper "Measuring evolutionary rates of proteins in a structural context"
  ☆13Updated 6 years ago
• zqfang / QPCR
  Calculate the Delta_Ct, Delta_Delta_Ct , Fold Changes and Student's t-tests from qRT-PCR experiment
  ☆26Updated 4 years ago
• seqcode / miniMDS
  ☆29Updated 7 months ago
• SuLab / Applied-Bioinformatics
  Student course material for the Applied Bioinformatics course at Scripps Research
  ☆37Updated 2 years ago