blab / sars-like-covLinks
This is a one-off Nextstrain build for SARS-like coronaviruses
☆81Updated 4 years ago
Alternatives and similar repositories for sars-like-cov
Users that are interested in sars-like-cov are comparing it to the libraries listed below
Sorting:
- Fishers Exact Test for Python (Cython)☆66Updated 6 months ago
- Phylogenetic tree library for JavaScript/Node.js☆36Updated 2 years ago
- DNAscan is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring ve…☆43Updated 3 years ago
- MerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data☆18Updated 2 years ago
- Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads☆17Updated 5 years ago
- PiGx SARS-CoV-2 wastewater sequencing pipeline☆18Updated 2 years ago
- Python-based framework for computational immunomics☆40Updated 4 years ago
- Computational biology utility scripts☆19Updated 5 months ago
- ☆24Updated 4 years ago
- ☆81Updated last year
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆75Updated last month
- Software, architecture, and data index design for the 2018/2019 Virus Discovery Project☆32Updated 5 years ago
- Ongoing analysis of COVID-19 using Galaxy, BioConda and public research infrastructures☆127Updated 2 years ago
- CNN based classifier for detecting viral sequences among metagenomic contigs☆34Updated 5 years ago
- ☆29Updated last year
- Store of the trained model for pangolin to access.☆55Updated 2 years ago
- Recipes for bioinformatics analyses with scikit-bio☆42Updated 2 weeks ago
- 3D Genome Browser☆32Updated 3 years ago
- ☆54Updated last month
- A tool for exploring large trees in the browser☆115Updated 2 weeks ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 5 years ago
- SRA python tools☆11Updated 4 years ago
- ☆24Updated 3 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆44Updated 9 years ago
- BioBombe: Sequentially compressed gene expression features enhances biological signatures☆66Updated last year
- Yet Another Motif Discovery Algorithm☆53Updated 6 years ago
- API providing access to papers and authors scraped from biorxiv.org☆57Updated 2 years ago
- Global phylogenies of SARS-CoV-2 sequences☆85Updated last year
- Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"☆32Updated 6 years ago
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago