a tool for identifying circular RNAs using RNA-Seq data
☆11Aug 10, 2015Updated 11 years ago
Alternatives and similar repositories for circRNAFinder
Users that are interested in circRNAFinder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Find circRNAs in RNA-seq data.☆15Jul 5, 2016Updated 10 years ago
- A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, …☆62Jun 1, 2019Updated 7 years ago
- Pipeline for finding circular RNAs from RNA-seq data, based on STAR. Used in (Westholm et al, Cell Reports, 2014).☆18Jan 17, 2023Updated 3 years ago
- Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms☆33Jul 14, 2017Updated 9 years ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆16Jun 17, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- circular RNA analysis toolset☆91Sep 8, 2024Updated 2 years ago
- tools to find circRNAs in RNA-seq data☆48Nov 16, 2017Updated 8 years ago
- An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs☆11Jul 13, 2019Updated 7 years ago
- DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies …☆38Aug 4, 2022Updated 4 years ago
- CircRNA testing and ploting R package☆10Nov 23, 2020Updated 5 years ago
- ☆15Jul 7, 2023Updated 3 years ago
- kanban taskboard (AngularJS+Go+goSQL)☆23Aug 15, 2017Updated 9 years ago
- A container for the forna visualization software.☆22May 30, 2024Updated 2 years ago
- Normalization for single cell RNA-seq data☆10Aug 25, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Jul 14, 2016Updated 10 years ago
- RNA-seq data analysis practical☆62Sep 9, 2014Updated 12 years ago
- Esse é um repositório oficial do grupo Dados Abertos .RN☆17Mar 14, 2020Updated 6 years ago
- 2018 RDKit UGM☆14Sep 28, 2018Updated 7 years ago
- CircAST is a computational tool for circular RNA full-length assembly and quantification using RNA-Seq data.☆10Jun 17, 2021Updated 5 years ago
- ☆11Aug 6, 2019Updated 7 years ago
- ☆13Sep 22, 2017Updated 9 years ago
- Single Cell RNA-seq UMI Filtering Facilitator☆10Oct 6, 2025Updated 11 months ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Aug 14, 2018Updated 8 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Markdown parser/formatter in pure JavaScript.☆32Dec 23, 2013Updated 12 years ago
- Introdução a Arquitetura de Computadores☆16Jun 26, 2016Updated 10 years ago
- ☆11Aug 3, 2018Updated 8 years ago
- Primer Seek in RNA-Seq. Designs RT-PCR primers that validate alternative splicing events from RNA-Seq data.☆13Nov 27, 2016Updated 9 years ago
- circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line dri…☆30Dec 19, 2023Updated 2 years ago
- Predict cell cycle phase in a continuum from single-cell RNA-seq data☆14Nov 14, 2020Updated 5 years ago
- ☆12Jul 6, 2023Updated 3 years ago
- Genome free discovery and classification of miRNAs from small RNA-Seq with random forests☆11Jun 12, 2018Updated 8 years ago
- ☆12Jan 3, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Mar 31, 2017Updated 9 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆15Jun 5, 2019Updated 7 years ago
- Identify differentially expressed k-mers between RNA-Seq datasets☆11Mar 1, 2021Updated 5 years ago
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆13Jan 5, 2023Updated 3 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆14Aug 22, 2017Updated 9 years ago
- In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data☆18Jan 19, 2018Updated 8 years ago
- Parsing Markdown with PegJS☆34Nov 1, 2011Updated 14 years ago