Bioinformatics'2022 PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction
☆39Nov 9, 2023Updated 2 years ago
Alternatives and similar repositories for PerceiverCPI
Users that are interested in PerceiverCPI are comparing it to the libraries listed below
Sorting:
- MulinforCPI: enhancing precision of compound-protein interaction prediction through novel perspectives on multi-level information integra…☆10Jun 20, 2024Updated last year
- ☆10Aug 20, 2023Updated 2 years ago
- a method for CPI and DTA prediction☆11Jun 18, 2022Updated 3 years ago
- DeepCDA☆15Mar 19, 2020Updated 6 years ago
- Pytorch Implementation of the original DeepDTA paper (https://github.com/hkmztrk/DeepDTA/)☆13Dec 3, 2024Updated last year
- HyperAttentionDTI: improving drug–protein interaction prediction by sequence-based deep learning with attention mechanism. This repositor…☆45Jun 9, 2021Updated 4 years ago
- SSM-DTA: Breaking the Barriers of Data Scarcity in Drug-Target Affinity Prediction (Briefings in Bioinformatics 2023)☆55May 28, 2024Updated last year
- a novel DTA predition method using graph neural network☆76Jul 12, 2023Updated 2 years ago
- InteractionGraphNet: a Novel and Efficient Deep Graph Representation Learning Framework for Accurate Protein-Ligand Interaction Predictio…☆47Jun 21, 2023Updated 2 years ago
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆28Feb 8, 2025Updated last year
- Learning Protein-Ligand Properties with Atomic Environment Vectors☆10Apr 19, 2024Updated last year
- AttentionDTA: prediction of drug–target binding affinity using attention model.https://ieeexplore.ieee.org/abstract/document/8983125☆13Aug 29, 2020Updated 5 years ago
- ☆11Jul 15, 2021Updated 4 years ago
- ☆12Jun 19, 2021Updated 4 years ago
- ISMB 2020: Improved survival analysis by learning shared genomic information from pan-cancer data☆17Jul 13, 2020Updated 5 years ago
- The standalone version / cli-tool of SPOT-Contact-Single available for public use for research purposes.☆16Feb 1, 2024Updated 2 years ago
- ☆14Jul 12, 2021Updated 4 years ago
- ☆67Jul 28, 2020Updated 5 years ago
- ☆19Mar 12, 2026Updated last week
- Paper for release☆11Sep 24, 2021Updated 4 years ago
- ☆13Sep 29, 2023Updated 2 years ago
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆14Dec 2, 2023Updated 2 years ago
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆11Jun 13, 2022Updated 3 years ago
- Learning from Negative samples for Biomedical Generative Entity Linking☆17May 25, 2025Updated 9 months ago
- DeepGS: Deep Representation Learning of Graphs and Sequences for Drug-Target Binding Affinity Prediction (ECAI 2020)☆26Oct 22, 2020Updated 5 years ago
- Interpretable bilinear attention network with domain adaptation improves drug-target prediction.☆141Feb 19, 2023Updated 3 years ago
- ☆48Aug 7, 2023Updated 2 years ago
- TransformerCPI: Improving compound–protein interaction prediction by sequence-based deep learning with self-attention mechanism and label…☆154Jun 30, 2022Updated 3 years ago
- ESMDynamic repo☆22Feb 25, 2026Updated 3 weeks ago
- Detection of the structural, evolutionary and functional relationship between different proteins and protein families requires comparativ…☆15Sep 22, 2023Updated 2 years ago
- Model to predict kinase-ligand pKi values.☆12Jul 6, 2023Updated 2 years ago
- Drug-Target Interaction Prediction with GraphAttention networks☆20May 7, 2020Updated 5 years ago
- ☆15Mar 28, 2025Updated 11 months ago
- ☆12Jul 3, 2021Updated 4 years ago
- CookingSense: A Culinary Knowledgebase with Multidisciplinary Assertions (LREC-COLING 2024)☆18Oct 9, 2024Updated last year
- This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".☆18Jan 4, 2025Updated last year
- ☆21Oct 22, 2024Updated last year
- A predictor of enzyme optimal temperature☆13Mar 13, 2025Updated last year
- Python package for protein sequence-based bidirectional recurrent neural network. Generalizable to a variety of protein bioinformatic app…☆21Aug 5, 2025Updated 7 months ago