biomed-AI / GraphCSLinks
☆14Updated 3 years ago
Alternatives and similar repositories for GraphCS
Users that are interested in GraphCS are comparing it to the libraries listed below
Sorting:
- single-cell RNA-seq clustering☆10Updated 4 years ago
- Simultaneous deep generative modeling and clustering of single cell genomic data☆32Updated 2 years ago
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆23Updated 2 years ago
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆19Updated 11 months ago
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆56Updated 3 years ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆50Updated 3 years ago
- ☆18Updated 3 years ago
- ☆31Updated 2 years ago
- ☆14Updated 3 years ago
- ☆29Updated 3 years ago
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 2 years ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆12Updated 4 years ago
- "Topological Identification and Interpretation for Single-cell Gene Regulation Elucidation across Multiple Platforms using scMGCA" in Nat…☆14Updated 2 years ago
- scDCC: Single Cell Deep Constrained Clustering☆40Updated 10 months ago
- Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attent…☆16Updated 5 years ago
- Deep Generative Modeling of RNA Velocity☆36Updated last month
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics☆40Updated 2 years ago
- Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network☆103Updated last year
- ☆44Updated 3 months ago
- ☆36Updated last week
- ☆55Updated last year
- covolutional neural network based coexpression analysis☆77Updated 4 years ago
- ☆13Updated 3 years ago
- Biological Network Integration using Convolutions☆62Updated last year
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆39Updated 2 years ago
- a unified single-cell data integration framework by optimal transport☆35Updated 8 months ago
- Pathway-based sparse deep neural network☆16Updated 4 years ago
- ☆30Updated last month
- A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data☆23Updated 5 months ago